RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 FAM167A-AS1Q96KT0 104 aa9.54□□□□□ -0.88
FGFR1-227ENST00000526570 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 F8WDY8 70 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 IGHV3-33P01772 117 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 C4orf26Q17RF5 130 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 RHPN1-AS1Q9BWJ2 59 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 DKK4Q9UBT3 224 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 SHANK1Q9Y566 2161 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 TRAV7A0A075B6U4 112 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 C19orf71A6NCJ1 209 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 GP9P14770 177 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 ADORA2A-AS1P86434 159 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
FGFR1-227ENST00000526570 ATP6V0E1O15342 81 aa9.52□□□□□ -0.89
FGFR1-227ENST00000526570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
FGFR1-227ENST00000526570 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.89
FGFR1-227ENST00000526570 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
FGFR1-227ENST00000526570 C15orf65H3BRN8 121 aa9.52□□□□□ -0.89
FGFR1-227ENST00000526570 KLK9Q9UKQ9 250 aa9.52□□□□□ -0.89
FGFR1-227ENST00000526570 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
FGFR1-227ENST00000526570 ZNF134P52741 427 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 PATE2Q6UY27 113 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 LENEPQ9Y5L5 61 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 MUC6Q6W4X9 2439 aa9.51□□□□□ -0.89
FGFR1-227ENST00000526570 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 ZNF833PQ6ZTB9 187 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 ZNF295-AS1Q8N0V1 137 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 PSPHP1O15172 72 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
FGFR1-227ENST00000526570 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 ATRXP46100 2492 aa9.5□□□□□ -0.89
FGFR1-227ENST00000526570 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 A0A0J9YY99 117 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 OVOL3O00110 214 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 PRR4Q16378 134 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 ARHGAP21Q5T5U3 1957 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 SPRNQ5BIV9 151 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 G3V318 75 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 NCR3O14931 201 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 PCNX2A6NKB5 2137 aa9.49□□□□□ -0.89
FGFR1-227ENST00000526570 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
FGFR1-227ENST00000526570 OBSL1O75147 1896 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 SPRY2O43597 315 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 TIRAPP58753 221 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 FAM110DQ8TAY7 271 aaPredicted RBP9.48□□□□□ -0.89
FGFR1-227ENST00000526570 PYGO1Q9Y3Y4 419 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 WISP2O76076 250 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 IGLV2-14P01704 120 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 XCL1P47992 114 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
FGFR1-227ENST00000526570 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
FGFR1-227ENST00000526570 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
FGFR1-227ENST00000526570 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
FGFR1-227ENST00000526570 LST1O00453 97 aa9.47□□□□□ -0.89
FGFR1-227ENST00000526570 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
FGFR1-227ENST00000526570 LINC00311Q8N616 119 aa9.47□□□□□ -0.89
FGFR1-227ENST00000526570 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 A0A087WW49 117 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 TEX22C9J3V5 150 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 Q8NA96 180 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 CTSZQ9UBR2 303 aa9.46□□□□□ -0.89
FGFR1-227ENST00000526570 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
FGFR1-227ENST00000526570 EBI3Q14213 229 aa9.46□□□□□ -0.9
FGFR1-227ENST00000526570 LINC01619G3V211 115 aa9.46□□□□□ -0.9
FGFR1-227ENST00000526570 GNRH2O43555 120 aa9.46□□□□□ -0.9
FGFR1-227ENST00000526570 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
FGFR1-227ENST00000526570 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.9
FGFR1-227ENST00000526570 IGKV4-1P06312 121 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 C11orf53Q8IXP5 236 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 IGHV4-61A0A0C4DH41 118 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 H7C423 109 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
FGFR1-227ENST00000526570 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
FGFR1-227ENST00000526570 IGKV1OR2-108A0A075B7D4 117 aa9.44□□□□□ -0.9
FGFR1-227ENST00000526570 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
FGFR1-227ENST00000526570 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
FGFR1-227ENST00000526570 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
FGFR1-227ENST00000526570 A8MZ25 164 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 DEFB112Q30KQ8 113 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 FGF23Q9GZV9 251 aaPredicted RBP9.43□□□□□ -0.9
FGFR1-227ENST00000526570 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 Q6ZSR3 168 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 FAM208BQ5VWN6 2430 aa9.43□□□□□ -0.9
FGFR1-227ENST00000526570 C9orf85Q96MD7 179 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms