RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 MT-ND4LP03901 98 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
CD44-221ENST00000526000 FOXA3P55318 350 aaPredicted RBP4.37□□□□□ -1.71
CD44-221ENST00000526000 ADIRFQ15847 76 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 C10orf126Q8N4M7 172 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 SYT8Q8NBV8 401 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
CD44-221ENST00000526000 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 SSBP4Q9BWG4 385 aaPredicted RBP4.37□□□□□ -1.71
CD44-221ENST00000526000 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 CARHSP1Q9Y2V2 147 aaKnown RBP4.37□□□□□ -1.71
CD44-221ENST00000526000 MYCBP2O75592 4640 aa4.37□□□□□ -1.71
CD44-221ENST00000526000 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 PGPEP1LA6NFU8 196 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 A8MWV9 139 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 KRTAP29-1A8MX34 341 aaPredicted RBP4.36□□□□□ -1.71
CD44-221ENST00000526000 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
CD44-221ENST00000526000 GATA1P15976 413 aaPredicted RBP4.36□□□□□ -1.71
CD44-221ENST00000526000 CACNG7P62955 275 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 RPL19P84098 196 aaKnown RBP4.36□□□□□ -1.71
CD44-221ENST00000526000 ZFP82Q8N141 532 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 SVBPQ8N300 66 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 SLC25A29Q8N8R3 303 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 DNAJC30Q96LL9 226 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 CTDSP1Q9GZU7 261 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 PHLDA3Q9Y5J5 127 aa4.36□□□□□ -1.71
CD44-221ENST00000526000 A0A087WWC5 75 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 A0A1B0GW15 77 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 H3BVH4 76 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 M0R036 132 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 RHODO00212 210 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 SNAPINO95295 136 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 ADCYAP1P18509 176 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 CTRLP40313 264 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 GAGE1Q13065 139 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 GAGE4Q13068 117 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 GAGE5Q13069 117 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 RHEBQ15382 184 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 GAGE13Q4V321 117 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 ZFP2Q6ZN57 461 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 DAZ4Q86SG3 579 aaKnown RBP4.35□□□□□ -1.71
CD44-221ENST00000526000 FER1L6-AS1Q8NA97 138 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 DEFB104AQ8WTQ1 72 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 BTF3L4Q96K17 158 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 IMMP2LQ96T52 175 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 RNASE7Q9H1E1 156 aaKnown RBP4.35□□□□□ -1.71
CD44-221ENST00000526000 DAZ3Q9NR90 486 aaKnown RBP4.35□□□□□ -1.71
CD44-221ENST00000526000 Q9UF83 564 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 V9GYV3 84 aa4.35□□□□□ -1.71
CD44-221ENST00000526000 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 TMSB15BA0A087X1C1 80 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 K7EP13 123 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 RS1O15537 224 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 S100A8P05109 93 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 TRGC1P0CF51 173 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 LELP1Q5T871 98 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 SPANXN1Q5VSR9 72 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 CFAP126Q5VTH2 177 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 SMIM15Q7Z3B0 74 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 TM2D2Q9BX73 214 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 NAT8BQ9UHF3 227 aa4.34□□□□□ -1.71
CD44-221ENST00000526000 A0A1B0GUT8 65 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 SMIM27A0A1W2PRY6 76 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 GRIFINA4D1Z8 144 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 HIGD1CA8MV81 97 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 APOC3P02656 99 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 RIGQ13278 110 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 KCNIP4Q6PIL6 250 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 LYZL1Q6UWQ5 148 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 SH2D6Q7Z4S9 175 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 ATP5L2Q7Z4Y8 100 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 CLRN3Q8NCR9 226 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 AP1S3Q96PC3 154 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 SAMD10Q9BYL1 202 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 JPT2Q9H910 190 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 PLA2G2DQ9UNK4 145 aa4.33□□□□□ -1.72
CD44-221ENST00000526000 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 SMIM17P0DL12 118 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 S100PP25815 95 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 TIRAPP58753 221 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 RHOHQ15669 191 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 COX19Q49B96 90 aa4.32□□□□□ -1.72
CD44-221ENST00000526000 RASL11AQ6T310 242 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms