RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
SSBP3-210ENST00000525990 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.15
SSBP3-210ENST00000525990 MGPP08493 103 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-210ENST00000525990 ATRAIDQ6UW56 229 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 CLPSL2Q6UWE3 100 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 C15orf54Q8N8G6 183 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 OR2D3Q8NGH3 330 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 DEFB104AQ8WTQ1 72 aa7.89□□□□□ -1.15
SSBP3-210ENST00000525990 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 GNG4P50150 75 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 TCTE3Q8IZS6 198 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 FER1L6-AS1Q8NA97 138 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 CHCHD5Q9BSY4 110 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
SSBP3-210ENST00000525990 VPS13BQ7Z7G8 4022 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 ANGP03950 147 aaKnown RBP7.87□□□□□ -1.15
SSBP3-210ENST00000525990 BCL2P10415 239 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 RAB5CP51148 216 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 GAGE6Q13070 117 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 SUMO4Q6EEV6 95 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 SCXQ7RTU7 201 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 RMI2Q96E14 147 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 VAX2Q9UIW0 290 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 COX11Q9Y6N1 276 aa7.87□□□□□ -1.15
SSBP3-210ENST00000525990 SRRM2Q9UQ35 2752 aaKnown RBP7.86□□□□□ -1.15
SSBP3-210ENST00000525990 M0QY20 66 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 HLA-DQA1P01909 254 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 SMIM17P0DL12 118 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 KCNIP4Q6PIL6 250 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 LYZL1Q6UWQ5 148 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 DAZAP1Q96EP5 407 aaKnown RBP7.86□□□□□ -1.15
SSBP3-210ENST00000525990 C1orf43Q9BWL3 253 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 MED9Q9NWA0 146 aa7.86□□□□□ -1.15
SSBP3-210ENST00000525990 hCG_2014768A0A024R1R8 64 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 K7EN84 100 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 PDE6DO43924 150 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 P01737 135 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 CRPP02741 224 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 NKX2-5P52952 324 aaPredicted RBP7.85□□□□□ -1.15
SSBP3-210ENST00000525990 RBX1P62877 108 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 ELOBQ15370 118 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 SLC51BQ86UW2 128 aa7.85□□□□□ -1.15
SSBP3-210ENST00000525990 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 Q0VG73 95 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 EIF5AL1Q6IS14 154 aaKnown RBP7.84□□□□□ -1.15
SSBP3-210ENST00000525990 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 Q6ZNX1 250 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 C9orf62Q8N4C0 152 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 NUDT10Q8NFP7 164 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 NUDT11Q96G61 164 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 RNASE7Q9H1E1 156 aaKnown RBP7.84□□□□□ -1.15
SSBP3-210ENST00000525990 MYCBP2O75592 4640 aa7.84□□□□□ -1.15
SSBP3-210ENST00000525990 TRBV25-1A0A075B6N4 114 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 IFNA1P01562 189 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 NTF3P20783 257 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
SSBP3-210ENST00000525990 LINC00269Q8N2A0 174 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 GFRA4Q9GZZ7 299 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 PRR34Q9NV39 138 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 HERC1Q15751 4861 aa7.83□□□□□ -1.16
SSBP3-210ENST00000525990 IGLV4-60A0A075B6I1 120 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 IGLV10-54A0A075B6I4 117 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 PRSS1P07477 247 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 CTRLP40313 264 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 CACNG7P62955 275 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 IQCJQ1A5X6 159 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 ALKAL2Q6UX46 152 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 C20orf203Q8NBC4 194 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 OCC1Q8TAD7 63 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 SMIM12Q96EX1 92 aa7.82□□□□□ -1.16
SSBP3-210ENST00000525990 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
SSBP3-210ENST00000525990 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 FOXA3P55318 350 aaPredicted RBP7.81□□□□□ -1.16
SSBP3-210ENST00000525990 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
SSBP3-210ENST00000525990 MIAQ16674 131 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.81□□□□□ -1.16
SSBP3-210ENST00000525990 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 CHAC1Q9BUX1 264 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 DPH3P1Q9H4G8 78 aa7.81□□□□□ -1.16
SSBP3-210ENST00000525990 F2Z2F3 143 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 H7C1H1 209 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 PANO1I0J062 215 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 TRGC1P0CF51 173 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 REG3AQ06141 175 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 TMEM97Q5BJF2 176 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
SSBP3-210ENST00000525990 RPP21Q9H633 154 aaKnown RBP7.8□□□□□ -1.16
SSBP3-210ENST00000525990 XKRY2A2RUG3 117 aa7.79□□□□□ -1.16
SSBP3-210ENST00000525990 TWIST1Q15672 202 aa7.79□□□□□ -1.16
SSBP3-210ENST00000525990 AKAP14Q86UN6 197 aa7.79□□□□□ -1.16
SSBP3-210ENST00000525990 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
SSBP3-210ENST00000525990 RPL39LQ96EH5 51 aaKnown RBP7.79□□□□□ -1.16
SSBP3-210ENST00000525990 NIT2Q9NQR4 276 aa7.79□□□□□ -1.16
SSBP3-210ENST00000525990 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms