RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 OR4C46A6NHA9 309 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 K7EMT4 169 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 TAAR5O14804 337 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 MRPS12O15235 138 aaKnown RBP2.25□□□□□ -2.05
CD44-219ENST00000525685 CRXO43186 299 aaPredicted RBP2.25□□□□□ -2.05
CD44-219ENST00000525685 MPDU1O75352 247 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 YIF1AO95070 293 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 IL4P05112 153 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 NMBP08949 121 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 CD7P09564 240 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 OR10J1P30954 320 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 H2BFSP57053 126 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 YPEL3P61236 119 aaPredicted RBP2.25□□□□□ -2.05
CD44-219ENST00000525685 ZNF90Q03938 601 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 AKR1C1Q04828 323 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 C4orf26Q17RF5 130 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 ORMDL2Q53FV1 153 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 SLC25A34Q6PIV7 304 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 GATD1Q8NB37 220 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 OR5A1Q8NGJ0 315 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 OR10D4PQ8NGN7 298 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 OR10J6PQ8NGY7 276 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 METTL26Q96S19 204 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 TIMM17AQ99595 171 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 TRGV9Q99603 122 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 PBDC1Q9BVG4 233 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 RHPN1-AS1Q9BWJ2 59 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 NMES1Q9C002 83 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 WFDC10AQ9H1F0 79 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 VSIRQ9H7M9 311 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 OR5AC2Q9NZP5 309 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 DOK5Q9P104 306 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 LAMTOR2Q9Y2Q5 125 aa2.25□□□□□ -2.05
CD44-219ENST00000525685 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 TRAV14DV4A0A0A6YYC5 116 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 UBE2L5PA0A1B0GUS4 154 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 TMEM223A0PJW6 202 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 LYRM9A8MSI8 78 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 FNDC10F2Z333 226 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 J3KT08 172 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 DEDDO75618 318 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CST7O76096 145 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 LINC00869P0C866 280 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CXCL3P19876 107 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 EVI2AP22794 236 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CRYBB3P26998 211 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 ATP6V0CP27449 155 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 SRIP30626 198 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 GNG4P50150 75 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CD164Q04900 197 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 SLC38A11Q08AI6 406 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 SYCNQ0VAF6 134 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 SMAGPQ0VAQ4 97 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CEMP1Q6PRD7 247 aaPredicted RBP2.24□□□□□ -2.05
CD44-219ENST00000525685 CYP2G1PQ6ZSU1 146 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 MRPL55Q7Z7F7 128 aaKnown RBP2.24□□□□□ -2.05
CD44-219ENST00000525685 HIST3H2BBQ8N257 126 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 FAM24BQ8N5W8 94 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 ZNF709Q8N972 641 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 FER1L6-AS1Q8NA97 138 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 OR11H7Q8NGC8 314 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 OR10P1Q8NGE3 313 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 PPP1R1CQ8WVI7 109 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 CAMK2N2Q96S95 79 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 MGST2Q99735 147 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 B9D2Q9BPU9 175 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 MIEN1Q9BRT3 115 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 MS4A6AQ9H2W1 248 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 EDA2RQ9HAV5 297 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 UQCC1Q9NVA1 299 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 RABAC1Q9UI14 185 aa2.24□□□□□ -2.05
CD44-219ENST00000525685 IGKV3-7A0A075B6H7 116 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 TRAV2A0A0B4J234 112 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 FABP5P3A8MUU1 101 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 ZNF705GA8MUZ8 300 aaPredicted RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 G3V3Q6 166 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 H3BRN7 92 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 J3QR89 54 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 M0R2Z0 102 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 CFDP00746 253 aaPredicted RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 OXTP01178 125 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 OR5G3P0C626 314 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 GZMBP10144 247 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 ORM2P19652 201 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 RAB5AP20339 215 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 NPPCP23582 126 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 ZNF138P52744 262 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 HIST1H1AQ02539 215 aaPredicted RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 HSD52Q0P140 79 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 IQCJQ1A5X6 159 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 ACOT6Q3I5F7 207 aaPredicted RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 KHDC3LQ587J8 217 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 DEFB121Q5J5C9 76 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 C1orf195Q5TG92 126 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 LINC00322Q6ZN03 302 aaPredicted RBP2.23□□□□□ -2.05
CD44-219ENST00000525685 GTF2H5Q6ZYL4 71 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 CBLN2Q8IUK8 224 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 SBSPONQ8IVN8 264 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 DEFB125Q8N687 156 aa2.23□□□□□ -2.05
CD44-219ENST00000525685 C15orf56Q8N910 161 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms