RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 FAM24AA6NFZ4 105 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 SNAI2O43623 268 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 TLX1NBP0CAT3 122 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 RAB2AP61019 212 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 MRPL55Q7Z7F7 128 aaKnown RBP3.68□□□□□ -1.82
NEDD8-203ENST00000524927 LINC00269Q8N2A0 174 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 AGPAT4-IT1Q9H0P7 198 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 ATG5Q9H1Y0 275 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 U3KQ87 197 aa3.68□□□□□ -1.82
NEDD8-203ENST00000524927 CEBPZOSA8MTT3 80 aa3.67□□□□□ -1.82
NEDD8-203ENST00000524927 MED6O75586 246 aa3.67□□□□□ -1.82
NEDD8-203ENST00000524927 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
NEDD8-203ENST00000524927 APH1BQ8WW43 257 aa3.67□□□□□ -1.82
NEDD8-203ENST00000524927 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
NEDD8-203ENST00000524927 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.67□□□□□ -1.82
NEDD8-203ENST00000524927 HYPMO75409 117 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 MT2AP02795 61 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 STAG3L3P0CL85 134 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 C9orf116Q5BN46 136 aaPredicted RBP3.66□□□□□ -1.82
NEDD8-203ENST00000524927 LAIR2Q6ISS4 152 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 LPCAT3Q6P1A2 487 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 OR13C8Q8NGS7 320 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 KCNS1Q96KK3 526 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 ATP6V1G3Q96LB4 118 aa3.66□□□□□ -1.82
NEDD8-203ENST00000524927 GVQW2A0A096LPI5 108 aaPredicted RBP3.65□□□□□ -1.83
NEDD8-203ENST00000524927 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 EFCAB10A6NFE3 127 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 L7N2F9 121 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
NEDD8-203ENST00000524927 ZNF266Q14584 549 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 SURF2Q15527 256 aaPredicted RBP3.65□□□□□ -1.83
NEDD8-203ENST00000524927 EIF5AL1Q6IS14 154 aaKnown RBP3.65□□□□□ -1.83
NEDD8-203ENST00000524927 CCDC124Q96CT7 223 aaKnown RBP3.65□□□□□ -1.83
NEDD8-203ENST00000524927 NDFIP1Q9BT67 221 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 FXYD6Q9H0Q3 95 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 CACFD1Q9UGQ2 172 aa3.65□□□□□ -1.83
NEDD8-203ENST00000524927 A0A1B0GVX0 72 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 TCRBV3S1A0A5B6 114 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 ARL6IP5O75915 188 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 OR5G3P0C626 314 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 SP6Q3SY56 376 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 TMEM78Q5T7P6 136 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 Q6AWC8 147 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 SPATA24Q86W54 205 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 BPIFA4PQ86YQ2 179 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 DAND5Q8N907 189 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 RAB2BQ8WUD1 216 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 ZNF492Q9P255 531 aa3.64□□□□□ -1.83
NEDD8-203ENST00000524927 GNRH2O43555 120 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 IGLC2P0DOY2 106 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 RBX1P62877 108 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 OR2T35Q8NGX2 323 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 RNASE11Q8TAA1 199 aaKnown RBP3.63□□□□□ -1.83
NEDD8-203ENST00000524927 PTH2Q96A98 100 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 CARD19Q96LW7 228 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 ORC6Q9Y5N6 252 aa3.63□□□□□ -1.83
NEDD8-203ENST00000524927 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 IFITM5A6NNB3 132 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 M0R3E3 92 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 MT1FP04733 61 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 HIST1H1EP10412 219 aaKnown RBP3.62□□□□□ -1.83
NEDD8-203ENST00000524927 FGF6P10767 208 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 TIMM17AQ99595 171 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 PRELID1Q9Y255 219 aa3.62□□□□□ -1.83
NEDD8-203ENST00000524927 H3BQ15 152 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 PTTG1O95997 202 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 IL5P05113 134 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 RAB5CP51148 216 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 PIGPP57054 158 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 TP53RKQ96S44 253 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 MTFP1Q9UDX5 166 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 PRO0461Q9UI25 63 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 NAGKQ9UJ70 344 aa3.61□□□□□ -1.83
NEDD8-203ENST00000524927 MYL12BO14950 172 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 TYMSP04818 313 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 LINC00869P0C866 280 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 UBE2D3P61077 147 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 UBE2D2P62837 147 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 GPX8Q8TED1 209 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 GLYATL2Q8WU03 294 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 ARV1Q9H2C2 271 aa3.6□□□□□ -1.83
NEDD8-203ENST00000524927 A8MWV9 139 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 K7EPK0 472 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
NEDD8-203ENST00000524927 TAS2R46P59540 309 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 RAB11AP62491 216 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 SMUG1Q53HV7 270 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 PATE2Q6UY27 113 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 TMEM91Q6ZNR0 172 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 CBLN2Q8IUK8 224 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 DTD1Q8TEA8 209 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 CYGBQ8WWM9 190 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 TVP23CQ96ET8 276 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms