RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 CTDSP1Q9GZU7 261 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 A0A087WWC5 75 aa11.07□□□□□ -0.64
PABPC1-221ENST00000522720 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
PABPC1-221ENST00000522720 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
PABPC1-221ENST00000522720 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
PABPC1-221ENST00000522720 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
PABPC1-221ENST00000522720 ATP6V1G1O75348 118 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 CACNG7P62955 275 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 ZNF56Q15929 161 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
PABPC1-221ENST00000522720 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
PABPC1-221ENST00000522720 A8MWL6 223 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 IBA57-AS1B1ANH7 110 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 F5H697 171 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 UBE2D3P61077 147 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 UBE2D2P62837 147 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
PABPC1-221ENST00000522720 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
PABPC1-221ENST00000522720 IGHV3-30P01768 117 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 IGHV3-30-5P0DP03 117 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 CT83Q5H943 113 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 WDR73Q6P4I2 378 aa11.04□□□□□ -0.64
PABPC1-221ENST00000522720 C7orf77A4D0Y5 90 aa11.03□□□□□ -0.64
PABPC1-221ENST00000522720 CTRLP40313 264 aa11.03□□□□□ -0.64
PABPC1-221ENST00000522720 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
PABPC1-221ENST00000522720 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
PABPC1-221ENST00000522720 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
PABPC1-221ENST00000522720 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
PABPC1-221ENST00000522720 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
PABPC1-221ENST00000522720 NTF3P20783 257 aa11.02□□□□□ -0.65
PABPC1-221ENST00000522720 IMMP2LQ96T52 175 aa11.02□□□□□ -0.65
PABPC1-221ENST00000522720 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
PABPC1-221ENST00000522720 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
PABPC1-221ENST00000522720 TRGC1P0CF51 173 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 KRTAP10-2P60368 255 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 LAGE3Q14657 143 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 NIT1Q86X76 327 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 Q8N3U1 123 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 TSKUQ8WUA8 353 aa11□□□□□ -0.65
PABPC1-221ENST00000522720 HERC2O95714 4834 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 M0QY20 66 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 EREGO14944 169 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 MGPP08493 103 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 S100PP25815 95 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-221ENST00000522720 KCNIP4Q6PIL6 250 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 V9GYV3 84 aa10.99□□□□□ -0.65
PABPC1-221ENST00000522720 A0A087WTM6 91 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 TRBV6-8A0A0A6YYG3 113 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 H7C1H1 209 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 TWIST1Q15672 202 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
PABPC1-221ENST00000522720 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-221ENST00000522720 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 Q9HAA7 133 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
PABPC1-221ENST00000522720 URGCP-MRPS24S4R325 110 aa10.98□□□□□ -0.65
PABPC1-221ENST00000522720 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
PABPC1-221ENST00000522720 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
PABPC1-221ENST00000522720 SMCO4Q9NRQ5 59 aa10.97□□□□□ -0.65
PABPC1-221ENST00000522720 PGPEP1Q9NXJ5 209 aa10.97□□□□□ -0.65
PABPC1-221ENST00000522720 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
PABPC1-221ENST00000522720 TRAV8-3A0A0A6YYJ7 113 aa10.96□□□□□ -0.65
PABPC1-221ENST00000522720 PSCAO43653 123 aa10.96□□□□□ -0.65
PABPC1-221ENST00000522720 TMEM97Q5BJF2 176 aa10.96□□□□□ -0.65
PABPC1-221ENST00000522720 BORCS7Q96B45 105 aa10.96□□□□□ -0.65
PABPC1-221ENST00000522720 CHCHD7Q9BUK0 85 aa10.96□□□□□ -0.65
PABPC1-221ENST00000522720 TRAV9-1A0A075B6T8 112 aa10.95□□□□□ -0.66
PABPC1-221ENST00000522720 A0A087WX48 190 aa10.95□□□□□ -0.66
PABPC1-221ENST00000522720 SMIM27A0A1W2PRY6 76 aa10.95□□□□□ -0.66
PABPC1-221ENST00000522720 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
PABPC1-221ENST00000522720 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
PABPC1-221ENST00000522720 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
PABPC1-221ENST00000522720 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
PABPC1-221ENST00000522720 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
PABPC1-221ENST00000522720 TM2D2Q9BX73 214 aa10.94□□□□□ -0.66
PABPC1-221ENST00000522720 TMEM262E9PQX1 116 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 ELOBQ15370 118 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 ATRAIDQ6UW56 229 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 NIT2Q9NQR4 276 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
PABPC1-221ENST00000522720 A0A1B0GW15 77 aa10.92□□□□□ -0.66
PABPC1-221ENST00000522720 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
PABPC1-221ENST00000522720 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
PABPC1-221ENST00000522720 S100A8P05109 93 aa10.91□□□□□ -0.66
PABPC1-221ENST00000522720 RIGQ13278 110 aa10.91□□□□□ -0.66
PABPC1-221ENST00000522720 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
PABPC1-221ENST00000522720 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms