RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 BORCS7Q96B45 105 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 PRO1933Q9H354 126 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 SIGLEC8Q9NYZ4 499 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 PRELID1Q9Y255 219 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 ZFP30Q9Y2G7 519 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 KLF12Q9Y4X4 402 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 LY96Q9Y6Y9 160 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 BAHCC1Q9P281 2608 aa1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 SETXQ7Z333 2677 aaKnown RBP1.91□□□□□ -2.1
CKS1BP7-201ENST00000522230 TRBV6-1A0A0K0K1D8 114 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 LOC100131303A0A0U1RQF7 123 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A1B0GUT8 65 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A1B0GXF2 115 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 C7orf71A4D174 169 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 FABP5P3A8MUU1 101 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 D6R8Y8 96 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 K7EMT4 169 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TCF21O43680 179 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 NPYP01303 97 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGHV3-53P01767 116 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TYMSP04818 313 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 CD7P09564 240 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 RBMY1A1P0DJD3 496 aaKnown RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 RBMY1CP0DJD4 496 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 BMI1P35226 326 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 LEPP41159 167 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 ASIPP42127 132 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 EMP1P54849 157 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 RBMY1FQ15415 496 aaKnown RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB114Q30KQ6 69 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 SAPCD1Q5SSQ6 148 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM74A4Q5TZK3 123 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 SPANXN1Q5VSR9 72 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 EBLN2Q6P2I7 272 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 C2orf66Q6UXQ4 117 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM231DQ6ZW35 169 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 ATOH7Q8N100 152 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TMEM86BQ8N661 226 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TEX29Q8N6K0 151 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 MYOZ3Q8TDC0 251 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 PACRGQ96M98 296 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 C12orf57Q99622 126 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 HIST1H2BLQ99880 126 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 PMCHL2Q9BQD1 86 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TCEAL7Q9BRU2 100 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 SAMD10Q9BYL1 202 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 MRPL16Q9NX20 251 aaKnown RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 XCL2Q9UBD3 114 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 TSSC4Q9Y5U2 329 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 HIVEP1P15822 2718 aa1.9□□□□□ -2.11
CKS1BP7-201ENST00000522230 CSMD1Q96PZ7 3565 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 LOC102724200A0A096LPH7 203 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 TRAV21A0A0B4J279 112 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A0J9YX75 114 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM168BA1KXE4 195 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RBAKDNA6NC62 111 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 A8MWP6 167 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 LGALS9O00182 355 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB4AO15263 64 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 NDUFS6O75380 124 aaKnown RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 HLA-DQA1P01909 254 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 PRB2P02812 416 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGLC6P0CF74 106 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGLL1P15814 213 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 MEOX2P50222 304 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RIPPLY3P57055 190 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RPS20P60866 119 aaKnown RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RPL32P62910 135 aaKnown RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 PYY3Q5JQD4 70 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 FA2HQ7L5A8 372 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 SPATA12Q7Z6I5 190 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 NIT1Q86X76 327 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 CEND1Q8N111 149 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB125Q8N687 156 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 C14orf178Q8N769 122 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 C18orf32Q8TCD1 76 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 RNF185Q96GF1 192 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 LINC01587Q99440 93 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 TMEM208Q9BTX3 173 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 GNB1LQ9BYB4 327 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 C16orf95Q9H693 158 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 NIT2Q9NQR4 276 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 TP73-AS1Q9UF72 201 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 CSMD2Q7Z408 3487 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 MUC4Q99102 2169 aa1.89□□□□□ -2.11
CKS1BP7-201ENST00000522230 ATRQ13535 2644 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGLV8-61A0A075B6I0 122 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 TRAV9-1A0A075B6T8 112 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGHV1OR15-1A0A075B7D0 117 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 OR4C46A6NHA9 309 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 OR11H12B2RN74 326 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 H3BMM0 161 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 TCAPO15273 167 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 551 ms