RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CENPWQ5EE01 88 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 FAM162BQ5T6X4 162 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 PRR9Q5T870 116 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 Q6ZQT7 251 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 EIF4E3Q8N5X7 224 aaKnown RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 Q8NAQ8 132 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 SMIM12Q96EX1 92 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 ZC2HC1AQ96GY0 325 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 DERL1Q9BUN8 251 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 C11orf68Q9H3H3 251 aaKnown RBP2.17□□□□□ -2.06
VPS13B-209ENST00000521559 EDA2RQ9HAV5 297 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 BIN3Q9NQY0 253 aa2.17□□□□□ -2.06
VPS13B-209ENST00000521559 TRBV20OR9-2A0A075B6H5 130 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 IGLV8-61A0A075B6I0 122 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 PLAC8L1A1L4L8 177 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 LINC00862A6NCI5 91 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 LYRM9A8MSI8 78 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 ZNF727A8MUV8 499 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 KRBOX1C9JBD0 128 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 GNRH2O43555 120 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 SH2D1AO60880 128 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 SERF1AO75920 110 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 IGLV2-8P01709 118 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 ORM1P02763 201 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 SPART-AS1P0CW21 52 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 EMP1P54849 157 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 TCL1AP56279 114 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM241Q24JQ0 296 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 LGALS9BQ3B8N2 356 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 SOHLH1Q5JUK2 328 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 DNLZQ5SXM8 178 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 IBA57Q5T440 356 aaKnown RBP2.16□□□□□ -2.06
VPS13B-209ENST00000521559 FAM222AQ5U5X8 452 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 UQCC3Q6UW78 93 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 TMEM263Q8WUH6 116 aaKnown RBP2.16□□□□□ -2.06
VPS13B-209ENST00000521559 C16orf74Q96GX8 76 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 KCNS1Q96KK3 526 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 NAGKQ9UJ70 344 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 TIMM8BQ9Y5J9 83 aaPredicted RBP2.16□□□□□ -2.06
VPS13B-209ENST00000521559 LY96Q9Y6Y9 160 aa2.16□□□□□ -2.06
VPS13B-209ENST00000521559 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 B4DEV8 164 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 K7EN84 100 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 M0R036 132 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 M0R2P5 195 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 SPINK4O60575 86 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 P01737 135 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 TYMSP04818 313 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 CXCL1P09341 107 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 MGST1P10620 155 aaKnown RBP2.15□□□□□ -2.07
VPS13B-209ENST00000521559 ASIPP42127 132 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 CEBPGP53567 150 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 RPS20P60866 119 aaKnown RBP2.15□□□□□ -2.07
VPS13B-209ENST00000521559 OR5I1Q13606 314 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 C12orf74Q32Q52 190 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 LINC01551Q86U37 167 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 COMMD7Q86VX2 200 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 C14orf178Q8N769 122 aaPredicted RBP2.15□□□□□ -2.07
VPS13B-209ENST00000521559 C11orf72Q8NBR9 251 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 OR2D3Q8NGH3 330 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 PTH2Q96A98 100 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 C18orf15Q96N68 181 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 SMIM7Q9BQ49 75 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 PPDPFQ9H3Y8 114 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 NOP10Q9NPE3 64 aaKnown RBP2.15□□□□□ -2.07
VPS13B-209ENST00000521559 IL36BQ9NZH7 164 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 NAT8Q9UHE5 227 aa2.15□□□□□ -2.07
VPS13B-209ENST00000521559 SORL1Q92673 2214 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 TMSB15BA0A087X1C1 80 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 TRGV1A0A0A0MS02 117 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 TRAV10A0A0B4J240 114 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 TMEM218A2RU14 115 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 XKRY2A2RUG3 117 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 GRIFINA4D1Z8 144 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 A8MWL6 223 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 F2Z2F3 143 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 C3orf84H3BNL1 204 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 GATCO43716 136 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 OR5AL1P0C617 328 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 SFTA3P0C7M3 94 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 ARMS2P0C7Q2 107 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 DEFB130BP0DP73 79 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 DEFB130AP0DP74 79 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 RNASE3P12724 160 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 S100A4P26447 101 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 DAD1P61803 113 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 RPL23P62829 140 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 RPL19P84098 196 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 LAGE3Q14657 143 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 UFSP1Q6NVU6 142 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 KCNIP4Q6PIL6 250 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 CEMP1Q6PRD7 247 aaPredicted RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 Q6ZTI0 123 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 FAM231DQ6ZW35 169 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 LINC01561Q8N1V8 128 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 MTURNQ8N3F0 131 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 C15orf54Q8N8G6 183 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 FER1L6-AS1Q8NA97 138 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 MUC7Q8TAX7 377 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 ISOC2Q96AB3 205 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms