RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 PKIAP61925 76 aa17.09■□□□□ 0.33
LAPTM4B-203ENST00000521545 TMEM97Q5BJF2 176 aa17.09■□□□□ 0.33
LAPTM4B-203ENST00000521545 TPPP3Q9BW30 176 aa17.09■□□□□ 0.33
LAPTM4B-203ENST00000521545 FAT1Q14517 4588 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 PDE6DO43924 150 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 IFNA1P01562 189 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 GNG4P50150 75 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 OR2D3Q8NGH3 330 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 CHCHD5Q9BSY4 110 aa17.08■□□□□ 0.32
LAPTM4B-203ENST00000521545 CRPP02741 224 aa17.07■□□□□ 0.32
LAPTM4B-203ENST00000521545 MEF2BQ02080 365 aaPredicted RBP17.07■□□□□ 0.32
LAPTM4B-203ENST00000521545 FER1L6-AS1Q8NA97 138 aa17.07■□□□□ 0.32
LAPTM4B-203ENST00000521545 SMIM12Q96EX1 92 aa17.07■□□□□ 0.32
LAPTM4B-203ENST00000521545 KIF25-AS1Q9Y6Z4 181 aa17.07■□□□□ 0.32
LAPTM4B-203ENST00000521545 XKRY2A2RUG3 117 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 RAB19A4D1S5 217 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 GZMBP10144 247 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 ATRAIDQ6UW56 229 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 TCTE3Q8IZS6 198 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 C15orf54Q8N8G6 183 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 C1orf43Q9BWL3 253 aa17.06■□□□□ 0.32
LAPTM4B-203ENST00000521545 IGLV2-8P01709 118 aa17.05■□□□□ 0.32
LAPTM4B-203ENST00000521545 ANGP03950 147 aaKnown RBP17.05■□□□□ 0.32
LAPTM4B-203ENST00000521545 BIN3Q9NQY0 253 aa17.05■□□□□ 0.32
LAPTM4B-203ENST00000521545 MED9Q9NWA0 146 aa17.05■□□□□ 0.32
LAPTM4B-203ENST00000521545 IGLC6P0CF74 106 aa17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 CACNG7P62955 275 aa17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 MPV17L2Q567V2 206 aa17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 SLC51BQ86UW2 128 aa17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 VAX2Q9UIW0 290 aa17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 SRRM2Q9UQ35 2752 aaKnown RBP17.04■□□□□ 0.32
LAPTM4B-203ENST00000521545 VPS13BQ7Z7G8 4022 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 C19orf71A6NCJ1 209 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 H7C1H1 209 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 P01737 135 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 MGPP08493 103 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 ENHOQ6UWT2 76 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 Q6ZSA8 131 aa17.03■□□□□ 0.32
LAPTM4B-203ENST00000521545 F2Z2F3 143 aa17.02■□□□□ 0.32
LAPTM4B-203ENST00000521545 C14orf177Q52M58 125 aa17.02■□□□□ 0.32
LAPTM4B-203ENST00000521545 BCL2P10415 239 aa17.01■□□□□ 0.31
LAPTM4B-203ENST00000521545 TRBV25-1A0A075B6N4 114 aa17■□□□□ 0.31
LAPTM4B-203ENST00000521545 LINC01620Q4KN68 170 aa17■□□□□ 0.31
LAPTM4B-203ENST00000521545 NTM-AS1Q6ZSK4 140 aa17■□□□□ 0.31
LAPTM4B-203ENST00000521545 TAGLN2P37802 199 aaKnown RBP16.99■□□□□ 0.31
LAPTM4B-203ENST00000521545 M0QY20 66 aa16.98■□□□□ 0.31
LAPTM4B-203ENST00000521545 TRGC1P0CF51 173 aa16.98■□□□□ 0.31
LAPTM4B-203ENST00000521545 GAGE6Q13070 117 aa16.98■□□□□ 0.31
LAPTM4B-203ENST00000521545 MIAQ16674 131 aa16.98■□□□□ 0.31
LAPTM4B-203ENST00000521545 TRBV20OR9-2A0A075B6H5 130 aa16.97■□□□□ 0.31
LAPTM4B-203ENST00000521545 PLA2G1BP04054 148 aaKnown RBP16.97■□□□□ 0.31
LAPTM4B-203ENST00000521545 SUMO4Q6EEV6 95 aa16.97■□□□□ 0.31
LAPTM4B-203ENST00000521545 LYZL1Q6UWQ5 148 aa16.97■□□□□ 0.31
LAPTM4B-203ENST00000521545 IGHV1-24A0A0C4DH33 117 aa16.96■□□□□ 0.31
LAPTM4B-203ENST00000521545 RBX1P62877 108 aa16.96■□□□□ 0.31
LAPTM4B-203ENST00000521545 IQCJQ1A5X6 159 aa16.95■□□□□ 0.3
LAPTM4B-203ENST00000521545 DNAH8Q96JB1 4490 aa16.95■□□□□ 0.3
LAPTM4B-203ENST00000521545 HLA-DQA1P01909 254 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 NTF3P20783 257 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 RASL11AQ6T310 242 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 LINC00528Q8N1L1 170 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 NUDT10Q8NFP7 164 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 NUDT11Q96G61 164 aa16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 DMBT1Q9UGM3 2413 aaPredicted RBP16.94■□□□□ 0.3
LAPTM4B-203ENST00000521545 NKX2-5P52952 324 aaPredicted RBP16.93■□□□□ 0.3
LAPTM4B-203ENST00000521545 WDR73Q6P4I2 378 aa16.93■□□□□ 0.3
LAPTM4B-203ENST00000521545 LINC00269Q8N2A0 174 aa16.93■□□□□ 0.3
LAPTM4B-203ENST00000521545 C9orf62Q8N4C0 152 aa16.93■□□□□ 0.3
LAPTM4B-203ENST00000521545 DPH3P1Q9H4G8 78 aa16.93■□□□□ 0.3
LAPTM4B-203ENST00000521545 PRR34Q9NV39 138 aa16.92■□□□□ 0.3
LAPTM4B-203ENST00000521545 FLG2Q5D862 2391 aaPredicted RBP16.92■□□□□ 0.3
LAPTM4B-203ENST00000521545 USP17L23D6RBM5 183 aa16.91■□□□□ 0.3
LAPTM4B-203ENST00000521545 CLPSL2Q6UWE3 100 aa16.91■□□□□ 0.3
LAPTM4B-203ENST00000521545 SCXQ7RTU7 201 aa16.91■□□□□ 0.3
LAPTM4B-203ENST00000521545 CHAC1Q9BUX1 264 aa16.91■□□□□ 0.3
LAPTM4B-203ENST00000521545 NIT2Q9NQR4 276 aa16.91■□□□□ 0.3
LAPTM4B-203ENST00000521545 Q6ZNX1 250 aa16.9■□□□□ 0.3
LAPTM4B-203ENST00000521545 TWIST1Q15672 202 aa16.89■□□□□ 0.29
LAPTM4B-203ENST00000521545 AKAP14Q86UN6 197 aa16.89■□□□□ 0.29
LAPTM4B-203ENST00000521545 TMEM243Q9BU79 118 aa16.89■□□□□ 0.29
LAPTM4B-203ENST00000521545 RPP21Q9H633 154 aaKnown RBP16.89■□□□□ 0.29
LAPTM4B-203ENST00000521545 CTRLP40313 264 aa16.88■□□□□ 0.29
LAPTM4B-203ENST00000521545 OCC1Q8TAD7 63 aa16.88■□□□□ 0.29
LAPTM4B-203ENST00000521545 RNASE7Q9H1E1 156 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-203ENST00000521545 BLOC1S1P78537 153 aa16.87■□□□□ 0.29
LAPTM4B-203ENST00000521545 REG3AQ06141 175 aa16.86■□□□□ 0.29
LAPTM4B-203ENST00000521545 PGLYRP4Q96LB8 373 aa16.86■□□□□ 0.29
LAPTM4B-203ENST00000521545 K7EN84 100 aa16.85■□□□□ 0.29
LAPTM4B-203ENST00000521545 DGAT2L7PQ6IED9 249 aa16.85■□□□□ 0.29
LAPTM4B-203ENST00000521545 CNFNQ9BYD5 112 aa16.85■□□□□ 0.29
LAPTM4B-203ENST00000521545 A0A1B0GUV1 79 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 UBE2L6O14933 153 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 PRSS1P07477 247 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 COTL1Q14019 142 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 SMIM15Q7Z3B0 74 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 CIRBP-AS1Q8TBR5 109 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 MYCBP2O75592 4640 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 HERC1Q15751 4861 aa16.84■□□□□ 0.29
LAPTM4B-203ENST00000521545 TMEM250H0YL14 139 aa16.83■□□□□ 0.28
LAPTM4B-203ENST00000521545 ALKAL2Q6UX46 152 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms