RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TRIOO75962 3097 aa2.04□□□□□ -2.08
HMGB1P41-201ENST00000520234 URB1O60287 2271 aaKnown RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGLV4-69A0A075B6H9 119 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TRBV20-1A0A075B6N2 111 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGHV3OR15-7A0A075B7D8 119 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 LY6LH3BQJ8 138 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 M0R1B8 84 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 NPYP01303 97 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TFF1P04155 84 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 IGKV1-16P04430 117 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TCRAP04437 139 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 LGALS1P09382 135 aaKnown RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 ARMS2P0C7Q2 107 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 SAA1P0DJI8 122 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 LINC00694P0DN24 101 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 SLC25A16P16260 332 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 RPL7P18124 248 aaKnown RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 FCER1GP30273 86 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 EFNA4P52798 201 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 WT1-ASQ06250 92 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 EDDM3AQ14507 147 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 KIAA0087Q14695 138 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 DEFB109BQ30KR1 87 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 MRPL51Q4U2R6 128 aaKnown RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM155Q4W5P6 130 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 MEIG1Q5JSS6 88 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 FAM19A5Q7Z5A7 132 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 Q86TA4 180 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 LYPD1Q8N2G4 141 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 ANKRD29Q8N6D5 301 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 OR8A1Q8NGG7 326 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 KIR2DL5BQ8NHK3 375 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 FMC1Q96HJ9 113 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 AMELXQ99217 191 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 CCL13Q99616 98 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 C21orf62Q9NYP8 219 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TMEM14CQ9P0S9 112 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 SDK1Q7Z5N4 2213 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 NBEAQ8NFP9 2946 aa2.03□□□□□ -2.08
HMGB1P41-201ENST00000520234 TECTAO75443 2155 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV12-1A0A0B4J245 112 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LOC107984640A0A0U1RRK4 108 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 RBMY1BA6NDE4 496 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 PGPA6NDG6 321 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 RBMY1EA6NEQ0 496 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 C9JAW5 83 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 E7EUB6 86 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 J3KT08 172 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LGALS9O00182 355 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 NPFFO15130 113 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 NDUFB3O43676 98 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 DPM2O94777 84 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 P01737 135 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGKCP01834 107 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 RBMY1DP0C7P1 496 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGLC6P0CF74 106 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 RBMY1A1P0DJD3 496 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 P0DMU3 169 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGHV1-8P0DP01 117 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 PYYP10082 97 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 CRYGAP11844 174 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 ORM2P19652 201 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LOXP28300 417 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 TCTAP57738 103 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 GNG5P63218 68 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 UBE2L3P68036 154 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 VMA21Q3ZAQ7 101 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 C5orf38Q86SI9 138 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 NDUFA11Q86Y39 141 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 C3orf22Q8N5N4 141 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM216BQ8N7L0 139 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 Q8N8P6 123 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 C15orf53Q8NAA6 179 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LY6G5BQ8NDX9 201 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 RNASE6Q93091 150 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LEAP2Q969E1 77 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 UPK3BQ9BT76 320 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 MRPL20Q9BYC9 149 aaKnown RBP2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 AGPAT4-IT1Q9H0P7 198 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 OTORQ9NRC9 128 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 SPANXCQ9NY87 97 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 HIGD1AQ9Y241 93 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 NACAE9PAV3 2078 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 LAMA1P25391 3075 aa2.02□□□□□ -2.09
HMGB1P41-201ENST00000520234 AHCTF1Q8WYP5 2266 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 MED13Q9UHV7 2174 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGKV2D-24A0A075B6R9 120 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 LINC01549A6NIU2 74 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 A8MWV9 139 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 D6R8Y8 96 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 BUB1B-PAK6H3BSN5 160 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 I3L2K1 104 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 UQCRQO14949 82 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 MRPS12O15235 138 aaKnown RBP2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 COX7A2P2O60397 106 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms