RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PLIN4Q96Q06 1357 aa1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 PDCD11Q14690 1871 aaKnown RBP1.67□□□□□ -2.14
HMGB1P46-201ENST00000520062 DAPK1P53355 1430 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 ABCC2Q92887 1545 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 BTAF1O14981 1849 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 MAP2P11137 1827 aaKnown RBP1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 UBE2L5PA0A1B0GUS4 154 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 EDF1O60869 148 aaKnown RBP1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 CYB5AP00167 134 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 CD3DP04234 171 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 PIPP12273 146 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 UBE2L3P68036 154 aaKnown RBP1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 DEFA5Q01523 94 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 ADIRFQ15847 76 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 MIC13Q5XKP0 118 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 CCL4L1Q8NHW4 92 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 SPTSSAQ969W0 71 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 PXDNQ92626 1479 aa1.66□□□□□ -2.14
HMGB1P46-201ENST00000520062 ARFGEF3Q5TH69 2177 aa1.65□□□□□ -2.14
HMGB1P46-201ENST00000520062 PPRC1Q5VV67 1664 aaKnown RBP1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 TOPAZ1Q8N9V7 1692 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 PLEKHH2Q8IVE3 1493 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGLC7A0M8Q6 106 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 J3QLW9 94 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 K7EP34 96 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 KRTDAPP60985 99 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 SEC11AP67812 179 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 Q5BKY6 102 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 SBSPONQ8IVN8 264 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 VSTM2AQ8TAG5 236 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 TSLPQ969D9 159 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 S100A16Q96FQ6 103 aaKnown RBP1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 DPH3P1Q9H4G8 78 aa1.65□□□□□ -2.15
HMGB1P46-201ENST00000520062 ROBO1Q9Y6N7 1651 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 PI4KAP42356 2102 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 CEP192Q8TEP8 1941 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MYO5CQ9NQX4 1742 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 TRAV2A0A0B4J234 112 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 M0R129 80 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 ATOX1O00244 68 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 SFT2D2O95562 160 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MT-ATP8P03928 68 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 UNQ5815/PRO19632Q6UWF5 114 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 ALKAL2Q6UX46 152 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 LINC00322Q6ZN03 302 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 SLC25A26Q70HW3 274 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MYOZ3Q8TDC0 251 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 LSM10Q969L4 123 aaKnown RBP1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MGST2Q99735 147 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 ST20Q9HBF5 79 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 TMEM14CQ9P0S9 112 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MROH1Q8NDA8 1641 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 CC2D2AQ9P2K1 1620 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 MAP3K4Q9Y6R4 1608 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 ARHGEF12Q9NZN5 1544 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 RGPD2P0DJD1 1756 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 C10orf71Q711Q0 1435 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 ANKARQ7Z5J8 1434 aa1.64□□□□□ -2.15
HMGB1P46-201ENST00000520062 NCOA2Q15596 1464 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 LAMB1P07942 1786 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGHV1-24A0A0C4DH33 117 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 TRBV7-7A0A0K0K1E9 115 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 H3BRM9 83 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 GNGT2O14610 69 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 IL5P05113 134 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 NMBP08949 121 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 CBLN1P23435 193 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 C5orf38Q86SI9 138 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 CLEC2BQ92478 149 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 NABP2Q9BQ15 211 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 SMIM7Q9BQ49 75 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 CACFD1Q9UGQ2 172 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 CLTCQ00610 1675 aaKnown RBP1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 USP54Q70EL1 1684 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 KIAA1549LQ6ZVL6 1849 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 MON2Q7Z3U7 1717 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 TNS1Q9HBL0 1735 aaKnown RBP1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 SPTBP11277 2137 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 ESPL1Q14674 2120 aa1.63□□□□□ -2.15
HMGB1P46-201ENST00000520062 KDM6BO15054 1643 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 ABCA9Q8IUA7 1624 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 MAGI3Q5TCQ9 1506 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGLV3-32A0A0A0MS00 114 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 A6NN06 94 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 NDUFC1O43677 76 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGKCP01834 107 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 SLC25A6P12236 298 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 CCL8P80075 99 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 TDRG1Q3Y452 100 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 SPANXN1Q5VSR9 72 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 PPDPFLQ8WWR9 84 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 PMCHL2Q9BQD1 86 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 HFM1A2PYH4 1435 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 CFAP74Q9C0B2 1584 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 LAMC3Q9Y6N6 1575 aa1.62□□□□□ -2.15
HMGB1P46-201ENST00000520062 KIF14Q15058 1648 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms