RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 IGHV3-64A0A075B6Q5 118 aa10□□□□□ -0.81
LMNA-223ENST00000515459 TRBV6-1A0A0K0K1D8 114 aa10□□□□□ -0.81
LMNA-223ENST00000515459 F5H697 171 aa10□□□□□ -0.81
LMNA-223ENST00000515459 LTAP01374 205 aa10□□□□□ -0.81
LMNA-223ENST00000515459 DEFA1P59665 94 aa10□□□□□ -0.81
LMNA-223ENST00000515459 DEFA3P59666 94 aa10□□□□□ -0.81
LMNA-223ENST00000515459 OR10AG1Q8NH19 301 aa10□□□□□ -0.81
LMNA-223ENST00000515459 DERL1Q9BUN8 251 aa10□□□□□ -0.81
LMNA-223ENST00000515459 ZNF471Q9BX82 626 aaPredicted RBP10□□□□□ -0.81
LMNA-223ENST00000515459 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
LMNA-223ENST00000515459 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
LMNA-223ENST00000515459 REG3AQ06141 175 aa9.99□□□□□ -0.81
LMNA-223ENST00000515459 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
LMNA-223ENST00000515459 CHTF8P0CG12 524 aa9.98□□□□□ -0.81
LMNA-223ENST00000515459 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
LMNA-223ENST00000515459 SPACA4Q8TDM5 124 aa9.98□□□□□ -0.81
LMNA-223ENST00000515459 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
LMNA-223ENST00000515459 TNXBP22105 4242 aa9.97□□□□□ -0.81
LMNA-223ENST00000515459 BORCS7-ASMTA0A0B4J1R7 106 aa9.97□□□□□ -0.81
LMNA-223ENST00000515459 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
LMNA-223ENST00000515459 P01737 135 aa9.97□□□□□ -0.81
LMNA-223ENST00000515459 C7orf33Q8WU49 177 aa9.97□□□□□ -0.81
LMNA-223ENST00000515459 PHOX2AO14813 284 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 SNAI2O43623 268 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 CXCL1P09341 107 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 AKR1C3P42330 323 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 IQCJQ1A5X6 159 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
LMNA-223ENST00000515459 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.82
LMNA-223ENST00000515459 LRP2P98164 4655 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 MUC21A0A0G2JKD1 596 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 MUC21A0A140T8X8 626 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 SLPIP03973 132 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 OR5AL1P0C617 328 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 FHITP49789 147 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 CST9LP1Q5W188 147 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 INO80EQ8NBZ0 244 aaPredicted RBP9.95□□□□□ -0.82
LMNA-223ENST00000515459 STOML3Q8TAV4 291 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 ALG5Q9Y673 324 aa9.95□□□□□ -0.82
LMNA-223ENST00000515459 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
LMNA-223ENST00000515459 GZMBP10144 247 aa9.94□□□□□ -0.82
LMNA-223ENST00000515459 SSTP61278 116 aa9.94□□□□□ -0.82
LMNA-223ENST00000515459 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
LMNA-223ENST00000515459 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
LMNA-223ENST00000515459 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
LMNA-223ENST00000515459 RAB5CP51148 216 aa9.93□□□□□ -0.82
LMNA-223ENST00000515459 Q5BKY6 102 aa9.93□□□□□ -0.82
LMNA-223ENST00000515459 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
LMNA-223ENST00000515459 S100A9P06702 114 aaKnown RBP9.92□□□□□ -0.82
LMNA-223ENST00000515459 AP1S3Q96PC3 154 aa9.92□□□□□ -0.82
LMNA-223ENST00000515459 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
LMNA-223ENST00000515459 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
LMNA-223ENST00000515459 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
LMNA-223ENST00000515459 ODF1Q14990 250 aa9.91□□□□□ -0.82
LMNA-223ENST00000515459 GTSF1Q8WW33 167 aa9.91□□□□□ -0.82
LMNA-223ENST00000515459 MED28Q9H204 178 aa9.91□□□□□ -0.82
LMNA-223ENST00000515459 H7C1H1 209 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 M0QY20 66 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 COX6A2Q02221 97 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 WDR73Q6P4I2 378 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
LMNA-223ENST00000515459 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
LMNA-223ENST00000515459 PAGE4O60829 102 aa9.89□□□□□ -0.83
LMNA-223ENST00000515459 NDUFS6O75380 124 aaKnown RBP9.89□□□□□ -0.83
LMNA-223ENST00000515459 MGPP08493 103 aa9.89□□□□□ -0.83
LMNA-223ENST00000515459 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
LMNA-223ENST00000515459 BAGE2Q86Y30 109 aa9.89□□□□□ -0.83
LMNA-223ENST00000515459 FXYD6-FXYD2A0A087WZ82 144 aa9.88□□□□□ -0.83
LMNA-223ENST00000515459 GIPP09681 153 aaPredicted RBP9.88□□□□□ -0.83
LMNA-223ENST00000515459 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
LMNA-223ENST00000515459 CFAP161Q6P656 301 aa9.88□□□□□ -0.83
LMNA-223ENST00000515459 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
LMNA-223ENST00000515459 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
LMNA-223ENST00000515459 UBE2L6O14933 153 aa9.87□□□□□ -0.83
LMNA-223ENST00000515459 SULT1A2P50226 295 aa9.87□□□□□ -0.83
LMNA-223ENST00000515459 STPG4Q8N801 248 aa9.87□□□□□ -0.83
LMNA-223ENST00000515459 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
LMNA-223ENST00000515459 SCO2A0A1W2PP80 73 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 NKX2-5P52952 324 aaPredicted RBP9.86□□□□□ -0.83
LMNA-223ENST00000515459 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 LYPD6BQ8NI32 183 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
LMNA-223ENST00000515459 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
LMNA-223ENST00000515459 RASL11AQ6T310 242 aa9.85□□□□□ -0.83
LMNA-223ENST00000515459 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
LMNA-223ENST00000515459 PFDN1O60925 122 aa9.84□□□□□ -0.83
LMNA-223ENST00000515459 HIGD2BQ4VC39 106 aa9.84□□□□□ -0.83
LMNA-223ENST00000515459 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
LMNA-223ENST00000515459 AMTP48728 403 aa9.83□□□□□ -0.84
LMNA-223ENST00000515459 TMUB2Q71RG4 321 aa9.83□□□□□ -0.84
LMNA-223ENST00000515459 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms