RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 EMP1P54849 157 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
SNX2-213ENST00000514949 PTH2Q96A98 100 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 TEX48A0A1B0GUV7 120 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 H3BMG7 143 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 TSPEAR-AS2P59090 65 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 COTL1Q14019 142 aa12.86□□□□□ -0.35
SNX2-213ENST00000514949 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 DEFB104AQ8WTQ1 72 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 CREBBPQ92793 2442 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 CR1P17927 2039 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 H3BMM0 161 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 WFDC2Q14508 124 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
SNX2-213ENST00000514949 PGPEP1Q9NXJ5 209 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
SNX2-213ENST00000514949 J3QQQ9 107 aa12.84□□□□□ -0.35
SNX2-213ENST00000514949 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
SNX2-213ENST00000514949 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
SNX2-213ENST00000514949 RPL24P83731 157 aaKnown RBP12.84□□□□□ -0.35
SNX2-213ENST00000514949 TMEM223A0PJW6 202 aa12.83□□□□□ -0.35
SNX2-213ENST00000514949 CRYBA4P53673 196 aa12.83□□□□□ -0.35
SNX2-213ENST00000514949 GAGE13Q4V321 117 aa12.83□□□□□ -0.35
SNX2-213ENST00000514949 LEPROTO15243 131 aa12.83□□□□□ -0.36
SNX2-213ENST00000514949 SLURP1P55000 103 aa12.83□□□□□ -0.36
SNX2-213ENST00000514949 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.36
SNX2-213ENST00000514949 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.36
SNX2-213ENST00000514949 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.36
SNX2-213ENST00000514949 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 DEFB131AP59861 70 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 LRRC75A-AS1Q8N1F1 130 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 PEMTQ9UBM1 199 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 A8MWV9 139 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 UBE2D3P61077 147 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 UBE2D2P62837 147 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
SNX2-213ENST00000514949 OPRPNQ99935 248 aaPredicted RBP12.82□□□□□ -0.36
SNX2-213ENST00000514949 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
SNX2-213ENST00000514949 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
SNX2-213ENST00000514949 M0R2P5 195 aa12.81□□□□□ -0.36
SNX2-213ENST00000514949 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
SNX2-213ENST00000514949 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
SNX2-213ENST00000514949 POLQO75417 2590 aa12.81□□□□□ -0.36
SNX2-213ENST00000514949 TSPAN13O95857 204 aa12.8□□□□□ -0.36
SNX2-213ENST00000514949 LGALS3P17931 250 aaKnown RBP12.8□□□□□ -0.36
SNX2-213ENST00000514949 C18orf65Q6ZTR6 163 aa12.8□□□□□ -0.36
SNX2-213ENST00000514949 VCX2Q9H322 139 aa12.8□□□□□ -0.36
SNX2-213ENST00000514949 RHODO00212 210 aa12.8□□□□□ -0.36
SNX2-213ENST00000514949 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SNX2-213ENST00000514949 UBR5O95071 2799 aaPredicted RBP12.8□□□□□ -0.36
SNX2-213ENST00000514949 DEFB136Q30KP8 78 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 TMEM61Q8N0U2 210 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 FAM104AQ969W3 186 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 FAM208BQ5VWN6 2430 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 J3QR89 54 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 DEFB113Q30KQ7 82 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
SNX2-213ENST00000514949 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
SNX2-213ENST00000514949 CLUHP3Q96NS8 147 aa12.78□□□□□ -0.36
SNX2-213ENST00000514949 CFC1BP0CG36 223 aa12.77□□□□□ -0.36
SNX2-213ENST00000514949 CFC1P0CG37 223 aa12.77□□□□□ -0.36
SNX2-213ENST00000514949 ZNF415Q09FC8 603 aa12.77□□□□□ -0.36
SNX2-213ENST00000514949 LYRM7Q5U5X0 104 aa12.77□□□□□ -0.36
SNX2-213ENST00000514949 ZNF462Q96JM2 2506 aa12.77□□□□□ -0.37
SNX2-213ENST00000514949 MRPS36P82909 103 aaKnown RBP12.77□□□□□ -0.37
SNX2-213ENST00000514949 ETDBQ3ZM63 59 aa12.77□□□□□ -0.37
SNX2-213ENST00000514949 DUX3Q96PT4 197 aa12.77□□□□□ -0.37
SNX2-213ENST00000514949 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 KRTAP10-9P60411 292 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 BEAN1Q3B7T3 259 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 TMEM86BQ8N661 226 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
SNX2-213ENST00000514949 CENPEQ02224 2701 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 APOMO95445 188 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 PROK1P58294 105 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 DEFB114Q30KQ6 69 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 ATP6V0E2Q8NHE4 81 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 SPXQ9BT56 116 aa12.75□□□□□ -0.37
SNX2-213ENST00000514949 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 USP24Q9UPU5 2620 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 PRB1P04280 392 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 DNAJC30Q96LL9 226 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
SNX2-213ENST00000514949 HTN1P15515 57 aa12.73□□□□□ -0.37
SNX2-213ENST00000514949 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
SNX2-213ENST00000514949 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
SNX2-213ENST00000514949 IGHV3-53P01767 116 aa12.73□□□□□ -0.37
SNX2-213ENST00000514949 CD28P10747 220 aa12.73□□□□□ -0.37
SNX2-213ENST00000514949 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms