RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 WI2-2373I1.2A0A1W2PRP0 233 aa5.65□□□□□ -1.5
PDLIM5-219ENST00000514743 EPM2AB3EWF7 344 aa5.65□□□□□ -1.5
PDLIM5-219ENST00000514743 M0R1W7 72 aa5.65□□□□□ -1.5
PDLIM5-219ENST00000514743 LYZP61626 148 aa5.65□□□□□ -1.5
PDLIM5-219ENST00000514743 SPTBN4Q9H254 2564 aa5.65□□□□□ -1.5
PDLIM5-219ENST00000514743 ACYP1P07311 99 aa5.65□□□□□ -1.51
PDLIM5-219ENST00000514743 FHL2Q14192 279 aa5.65□□□□□ -1.51
PDLIM5-219ENST00000514743 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.51
PDLIM5-219ENST00000514743 Q9H3A6 140 aa5.65□□□□□ -1.51
PDLIM5-219ENST00000514743 DPM3Q9P2X0 92 aa5.65□□□□□ -1.51
PDLIM5-219ENST00000514743 TIMM17BO60830 172 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 IGLV2-11P01706 119 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 FAM104BQ5XKR9 115 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 C5orf38Q86SI9 138 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 FMC1Q96HJ9 113 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 TMEM14CQ9P0S9 112 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 F8W735 103 aaPredicted RBP5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 H7C2G1 150 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 OVOL3O00110 214 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 SAA4P35542 130 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 NDPQ00604 133 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 PLGLAQ15195 96 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 FAM223AQ8IWN6 122 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 Q8N6K4 173 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 EEF1AKMT3Q96AZ1 226 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 RPP21Q9H633 154 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 RBM12B-AS1Q9P1G2 102 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 AKAP6Q13023 2319 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 HIVEP3Q5T1R4 2406 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 VMO1Q7Z5L0 202 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
PDLIM5-219ENST00000514743 WNK2Q9Y3S1 2297 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 H3BRN7 92 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 RBM3P98179 157 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 Q1RN00 199 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 ZNF491Q8N8L2 437 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 MOB4Q9Y3A3 225 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 IGLV11-55A0A075B6I3 123 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 Q6ZRU5 148 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 Q86TA4 180 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 PRR15Q8IV56 129 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 LINC00474Q9P2X8 69 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 CACNA1AO00555 2505 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 TRAV40A0A0B4J280 105 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 SMCR5Q8TEV8 140 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 COPS9Q8WXC6 57 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 ZNF492Q9P255 531 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
PDLIM5-219ENST00000514743 HOXD3P31249 432 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 ABCA2Q9BZC7 2435 aa5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 TRBV19A0A075B6N1 114 aa5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 TRBV7-1A0A0A6YYK4 115 aa5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 COL6A6A6NMZ7 2263 aa5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 CELSR2Q9HCU4 2923 aa5.62□□□□□ -1.51
PDLIM5-219ENST00000514743 SLC50A1Q9BRV3 221 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 SPTBN1Q01082 2364 aaKnown RBP5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 IGHV3OR16-8A0A075B7F1 116 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 TRBV6-1A0A0K0K1D8 114 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 CHD8Q9HCK8 2581 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 CSMD2Q7Z408 3487 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 M0R3E3 92 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 IGHV3-23P01764 117 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 VPREB1P12018 145 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 ERCC8Q13216 396 aa5.61□□□□□ -1.51
PDLIM5-219ENST00000514743 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 GATA1P15976 413 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 C11orf68Q9H3H3 251 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 COL12A1Q99715 3063 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 IGHV7-81A0A0B4J1V7 117 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 IGHV3-35A0A0C4DH35 117 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 D6R8Y8 96 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 CFC1BP0CG36 223 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 CFC1P0CG37 223 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 RPL11P62913 178 aaKnown RBP5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 RHOHQ15669 191 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 TMEM75Q8N9X5 138 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 DCANP1Q8TF63 244 aa5.6□□□□□ -1.51
PDLIM5-219ENST00000514743 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 K7EMT4 169 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 DAD1P61803 113 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 MINOS1Q5TGZ0 78 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 Q8N9W7 124 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 ITLN2Q8WWU7 325 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 LINC01600Q96MT4 127 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 GFRA4Q9GZZ7 299 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 MRPL35Q9NZE8 188 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 MINOS1-NBL1R4GNA1 71 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 NCOR2Q9Y618 2525 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 A0A0B4J2C4 111 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 ARMS2P0C7Q2 107 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 RIGQ13278 110 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 DEFB121Q5J5C9 76 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 IGFL4Q6B9Z1 124 aa5.59□□□□□ -1.51
PDLIM5-219ENST00000514743 Q8N8P6 123 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms