RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
PFDN1-206ENST00000514611 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
PFDN1-206ENST00000514611 FAT3Q8TDW7 4589 aa8.7□□□□□ -1.02
PFDN1-206ENST00000514611 F5H697 171 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 CRPP02741 224 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
PFDN1-206ENST00000514611 CCL20P78556 96 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 Q0VG73 95 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 TMUB2Q71RG4 321 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 GNG13Q9P2W3 67 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
PFDN1-206ENST00000514611 LRP1Q07954 4544 aaKnown RBP8.68□□□□□ -1.02
PFDN1-206ENST00000514611 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
PFDN1-206ENST00000514611 GZMBP10144 247 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 CENPWQ5EE01 88 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 C11orf52Q96A22 123 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
PFDN1-206ENST00000514611 HLA-DQA1P01909 254 aa8.67□□□□□ -1.02
PFDN1-206ENST00000514611 TPPP3Q9BW30 176 aa8.67□□□□□ -1.02
PFDN1-206ENST00000514611 MANBALQ9NQG1 85 aa8.67□□□□□ -1.02
PFDN1-206ENST00000514611 J3QL48 77 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 IGLV2-8P01709 118 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 MGPP08493 103 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
PFDN1-206ENST00000514611 GAGE6Q13070 117 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 CHAC1Q9BUX1 264 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 VAX2Q9UIW0 290 aa8.66□□□□□ -1.02
PFDN1-206ENST00000514611 USP17L23D6RBM5 183 aa8.65□□□□□ -1.02
PFDN1-206ENST00000514611 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
PFDN1-206ENST00000514611 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.65□□□□□ -1.02
PFDN1-206ENST00000514611 RAB19A4D1S5 217 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
PFDN1-206ENST00000514611 RBX1P62877 108 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 MIAQ16674 131 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 FER1L6-AS1Q8NA97 138 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
PFDN1-206ENST00000514611 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 M0QY20 66 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 PKIAP61925 76 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
PFDN1-206ENST00000514611 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
PFDN1-206ENST00000514611 PRSS1P07477 247 aa8.62□□□□□ -1.03
PFDN1-206ENST00000514611 GNG4P50150 75 aa8.62□□□□□ -1.03
PFDN1-206ENST00000514611 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
PFDN1-206ENST00000514611 KRTAP26-1Q6PEX3 210 aa8.62□□□□□ -1.03
PFDN1-206ENST00000514611 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
PFDN1-206ENST00000514611 IGHV1-24A0A0C4DH33 117 aa8.61□□□□□ -1.03
PFDN1-206ENST00000514611 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
PFDN1-206ENST00000514611 SULT1A2P50226 295 aa8.61□□□□□ -1.03
PFDN1-206ENST00000514611 RAB5CP51148 216 aa8.61□□□□□ -1.03
PFDN1-206ENST00000514611 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
PFDN1-206ENST00000514611 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
PFDN1-206ENST00000514611 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
PFDN1-206ENST00000514611 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
PFDN1-206ENST00000514611 P01737 135 aa8.6□□□□□ -1.03
PFDN1-206ENST00000514611 CACNG7P62955 275 aa8.6□□□□□ -1.03
PFDN1-206ENST00000514611 C20orf203Q8NBC4 194 aa8.6□□□□□ -1.03
PFDN1-206ENST00000514611 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
PFDN1-206ENST00000514611 TEX46H3BTG2 121 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 H7C1H1 209 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 PDE6DO43924 150 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 BCL2P10415 239 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 REG3AQ06141 175 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
PFDN1-206ENST00000514611 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 GFRA4Q9GZZ7 299 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 MED9Q9NWA0 146 aa8.59□□□□□ -1.03
PFDN1-206ENST00000514611 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 IGLV4-60A0A075B6I1 120 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 XKRY2A2RUG3 117 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 PANO1I0J062 215 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 IFNA1P01562 189 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
PFDN1-206ENST00000514611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
PFDN1-206ENST00000514611 F2Z2F3 143 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 NTF3P20783 257 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 CTRLP40313 264 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 TMEM243Q9BU79 118 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
PFDN1-206ENST00000514611 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
PFDN1-206ENST00000514611 TCTE3Q8IZS6 198 aa8.56□□□□□ -1.04
PFDN1-206ENST00000514611 NUDT10Q8NFP7 164 aa8.56□□□□□ -1.04
PFDN1-206ENST00000514611 NUDT11Q96G61 164 aa8.56□□□□□ -1.04
PFDN1-206ENST00000514611 PGLYRP4Q96LB8 373 aa8.56□□□□□ -1.04
PFDN1-206ENST00000514611 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms