RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
NEDD9-214ENST00000513989 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
NEDD9-214ENST00000513989 RPL36ALQ969Q0 106 aaKnown RBP7.13□□□□□ -1.27
NEDD9-214ENST00000513989 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
NEDD9-214ENST00000513989 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
NEDD9-214ENST00000513989 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 A0A0J9YY99 117 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 APCSP02743 223 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 GYPEP15421 78 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 LINC00315P59091 139 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 CBLN2Q8IUK8 224 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 ICOSQ9Y6W8 199 aa7.12□□□□□ -1.27
NEDD9-214ENST00000513989 M0QY20 66 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 NUDT3O95989 172 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 SRIP30626 198 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 FABP9Q0Z7S8 132 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 Q6ZSN1 163 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 TRAPPC1Q9Y5R8 145 aa7.11□□□□□ -1.27
NEDD9-214ENST00000513989 TRBV7-3A0A075B6L6 115 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 MRPL51Q4U2R6 128 aaKnown RBP7.1□□□□□ -1.27
NEDD9-214ENST00000513989 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 VSIG2Q96IQ7 327 aa7.1□□□□□ -1.27
NEDD9-214ENST00000513989 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 GAGE1Q13065 139 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 GAGE4Q13068 117 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 GAGE5Q13069 117 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 DAZ4Q86SG3 579 aaKnown RBP7.09□□□□□ -1.27
NEDD9-214ENST00000513989 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 DAZ3Q9NR90 486 aaKnown RBP7.09□□□□□ -1.27
NEDD9-214ENST00000513989 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
NEDD9-214ENST00000513989 MUC4Q99102 2169 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 TRAV26-2A0A0B4J265 109 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 D6R8Y8 96 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 PHOX2AO14813 284 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 SCO1O75880 301 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
NEDD9-214ENST00000513989 CCL18P55774 89 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 TMEM97Q5BJF2 176 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 NEXN-AS1Q8NBZ9 246 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 ATP6V0E2Q8NHE4 81 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
NEDD9-214ENST00000513989 MRPL18Q9H0U6 180 aaKnown RBP7.08□□□□□ -1.28
NEDD9-214ENST00000513989 DNAH10Q8IVF4 4471 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 A0A096LPF7 62 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 COLCA2A8K830 154 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 VCYO14598 125 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 P0DMU3 169 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 FAM231AP0DMU4 169 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 FAM231CP0DMU5 169 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 RAB5AP20339 215 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
NEDD9-214ENST00000513989 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 LCE2BO14633 110 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 TCAPO15273 167 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 PMCHP20382 165 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 UBE2D3P61077 147 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 SUMO2P61956 95 aaKnown RBP7.06□□□□□ -1.28
NEDD9-214ENST00000513989 UBE2D2P62837 147 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 APLNQ9ULZ1 77 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 HECTD4Q9Y4D8 3996 aa7.06□□□□□ -1.28
NEDD9-214ENST00000513989 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 I3L3M4 83 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 NCR2O95944 276 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 TIRAPP58753 221 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
NEDD9-214ENST00000513989 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 MAP1LC3AQ9H492 121 aa7.05□□□□□ -1.28
NEDD9-214ENST00000513989 TRAV8-6A0A0B4J262 113 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
NEDD9-214ENST00000513989 COTL1Q14019 142 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 UBE2DNLQ8IWF7 75 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 NRACQ8N912 160 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 Q9UF83 564 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 HERC2O95714 4834 aa7.04□□□□□ -1.28
NEDD9-214ENST00000513989 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 LOC389332A0A1B0GUA5 103 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 PRSS47A8MTI9 375 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 TRGC2P03986 189 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 G0S2P27469 103 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 FCER1GP30273 86 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
NEDD9-214ENST00000513989 PKIAP61925 76 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 ESRGQ1W209 222 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms