RNA–Protein interactions for RNA: ENST00000512479.1

PTP4A1P4-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 4, humanhuman

BASIC

Gene PTP4A1P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P4-201ENST00000512479 CCL8P80075 99 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 RBM3P98179 157 aaKnown RBP0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CATR1Q13166 79 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 INSL4Q14641 139 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SPINK9Q5DT21 86 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ZNF818PQ6ZRF7 136 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PARP14Q460N5 1801 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PHIPQ8WWQ0 1821 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CUL7Q14999 1698 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 QRICH2Q9H0J4 1663 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 FAM135AQ9P2D6 1515 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 NWD2Q9ULI1 1742 aa0.58□□□□□ -2.32
PTP4A1P4-201ENST00000512479 KTN1Q86UP2 1357 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 RBBP6Q7Z6E9 1792 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 KNTC1P50748 2209 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MAP2P11137 1827 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MYOM2P54296 1465 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 A0A087WTM6 91 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 A0A096LNT2 108 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TRBV7-1A0A0A6YYK4 115 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TRAV13-2A0A0B4J235 113 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CORTO00230 105 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TNFP01375 233 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 S100A1P23297 94 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 GNG4P50150 75 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TPPP2P59282 170 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MRPS10P82664 201 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 WHAMMP3Q1A5X7 153 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 C6orf52Q5T4I8 152 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MRPL54Q6P161 138 aaKnown RBP0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PPP3R2Q96LZ3 170 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 V9GYV3 84 aa0.57□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CASKIN1Q8WXD9 1431 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 RIMS1Q86UR5 1692 aaKnown RBP0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MED13LQ71F56 2210 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ABCA1O95477 2261 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CLPSL1A2RUU4 121 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 HCG22E2RYF7 251 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SIX6O95475 246 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 EDDM3BP56851 147 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 C9orf153Q5TBE3 101 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 LINC00312Q9Y6C7 94 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ARFGEF1Q9Y6D6 1849 aa0.56□□□□□ -2.32
PTP4A1P4-201ENST00000512479 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 OOSP1A8MZH6 123 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 F2Z2F3 143 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 S100PP25815 95 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PPP3R1P63098 170 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PRB3Q04118 309 aaPredicted RBP0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 C8orf59Q8N0T1 100 aaPredicted RBP0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 AQP10Q96PS8 301 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CGREF1Q99674 301 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 IER3IP1Q9Y5U9 82 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 LRRC37A3O60309 1634 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ARAP2Q8WZ64 1704 aa0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CPSF1Q10570 1443 aaKnown RBP0.55□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PATJQ8NI35 1801 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TANC1Q9C0D5 1861 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 A0A0D9SG42 100 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 C5orf38Q86SI9 138 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 Q96NJ1 140 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SPANXDQ9BXN6 97 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 BPESC1Q9GZL8 116 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SCP2D1Q9UJQ7 156 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SIPA1L3O60292 1781 aaPredicted RBP0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PXDNQ92626 1479 aa0.54□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ROBO1Q9Y6N7 1651 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TNS1Q9HBL0 1735 aaKnown RBP0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SSSCA1O60232 199 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 ACYP2P14621 99 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 C10orf128Q5T292 105 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 COMMD6Q7Z4G1 85 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SVBPQ8N300 66 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 TTC9CQ8N5M4 171 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 SMIM11BQ8TCY0 68 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 WFDC6Q9BQY6 131 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 CYP4F30PQ9H0H9 118 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 MYH8P13535 1937 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PPIP5K1Q6PFW1 1433 aa0.53□□□□□ -2.32
PTP4A1P4-201ENST00000512479 PZPP20742 1482 aa0.53□□□□□ -2.33
PTP4A1P4-201ENST00000512479 F5P12259 2224 aa0.53□□□□□ -2.33
PTP4A1P4-201ENST00000512479 CDK13Q14004 1512 aaKnown RBP0.53□□□□□ -2.33
PTP4A1P4-201ENST00000512479 NRKQ7Z2Y5 1582 aa0.53□□□□□ -2.33
PTP4A1P4-201ENST00000512479 DOCK1Q14185 1865 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 GVQW2A0A096LPI5 108 aaPredicted RBP0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 TRGV1A0A0A0MS02 117 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 C20orf202A1L168 122 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 FAM24AA6NFZ4 105 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 SMIM6P0DI80 62 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 GTF2H5Q6ZYL4 71 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 TCEAL7Q9BRU2 100 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 MAPKBP1O60336 1514 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 DOCK2Q92608 1830 aa0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
PTP4A1P4-201ENST00000512479 TRAV1-2A0A0B4J238 106 aa0.51□□□□□ -2.33
PTP4A1P4-201ENST00000512479 UBE2L5PA0A1B0GUS4 154 aa0.51□□□□□ -2.33
PTP4A1P4-201ENST00000512479 TMEM14DPA8MWL7 114 aa0.51□□□□□ -2.33
PTP4A1P4-201ENST00000512479 PPP1R17O96001 155 aa0.51□□□□□ -2.33
PTP4A1P4-201ENST00000512479 IFITM1P13164 125 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms