RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 LINC01590Q5TEZ4 76 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 SDIM1Q6ZPB5 146 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 MPDZO75970 2070 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 WDR87Q6ZQQ6 2873 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGKV1D-17A0A075B6S4 117 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 H3BUT2 72 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 LSM3P62310 102 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 C1orf134Q5TEV5 83 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 RPL36ALQ969Q0 106 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 CST11Q9H112 138 aa4.18□□□□□ -1.74
TRAPPC11-209ENST00000512476 A0A1B0GW54 56 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 CCKP06307 115 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 COL8A2P25067 703 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 SPATA45Q537H7 98 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 SLC25A26Q70HW3 274 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 OR8B2Q96RD0 313 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 NDUFB11Q9NX14 153 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGKV1D-37A0A075B6S9 117 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 H3BRM9 83 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 C16orf74Q96GX8 76 aa4.17□□□□□ -1.74
TRAPPC11-209ENST00000512476 DOCK10Q96BY6 2186 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGLV11-55A0A075B6I3 123 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 E7EQL1 145 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 GYPAP02724 150 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 ROMO1P60602 79 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 MIAQ16674 131 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 C9orf129Q5T035 196 aaKnown RBP4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 TTTY12Q9BZ98 90 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 CYTL1Q9NRR1 136 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 ICOSQ9Y6W8 199 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 EP300Q09472 2414 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 TRBV7-7A0A0K0K1E9 115 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 C19orf84I3L1E1 186 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 J3QLW9 94 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 SSSCA1O60232 199 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 DEFB109BQ30KR1 87 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 MIR7-3HGQ8N6C7 128 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 FDCSPQ8NFU4 85 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 TTTY10Q9BZA0 68 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 RPS10P5Q9NQ39 176 aa4.16□□□□□ -1.74
TRAPPC11-209ENST00000512476 MUC6Q6W4X9 2439 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 KNTC1P50748 2209 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 IGHV3-15A0A0B4J1V0 119 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 LYZP61626 148 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 XAGE1AQ9HD64 81 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 HIGD1BQ9P298 99 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 CACFD1Q9UGQ2 172 aa4.15□□□□□ -1.74
TRAPPC11-209ENST00000512476 AHCTF1Q8WYP5 2266 aa4.15□□□□□ -1.75
TRAPPC11-209ENST00000512476 RPS27P42677 84 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-209ENST00000512476 RPP21Q9H633 154 aaKnown RBP4.15□□□□□ -1.75
TRAPPC11-209ENST00000512476 TMEM14AQ9Y6G1 99 aa4.15□□□□□ -1.75
TRAPPC11-209ENST00000512476 AGRNO00468 2067 aa4.15□□□□□ -1.75
TRAPPC11-209ENST00000512476 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 UBE2G1P62253 170 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 NMSQ5H8A3 153 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 C5orf38Q86SI9 138 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 LINC01560Q8TB33 94 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGHV3-73A0A0B4J1V6 119 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGHV3-64DA0A0J9YX35 117 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 A0A1W2PPR1 153 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGLV1-44P01699 117 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 RNASE2P10153 161 aaKnown RBP4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 SEC11AP67812 179 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 RHOHQ15669 191 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 Q6ZR03 302 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 PPDPFLQ8WWR9 84 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 LY96Q9Y6Y9 160 aa4.14□□□□□ -1.75
TRAPPC11-209ENST00000512476 ZNF292O60281 2723 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 TRAV17A0A0B4J275 112 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 EIF4EBP1Q13541 118 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 ZFHX2Q9C0A1 2572 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 NPYP01303 97 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGHV1-46P01743 117 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 CRPP02741 224 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 C10orf128Q5T292 105 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
TRAPPC11-209ENST00000512476 DMXL1Q9Y485 3027 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 TRBV24-1A0A075B6N3 115 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGKV3D-15A0A087WSY6 115 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 A8MU10 97 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 LINC00479Q96M42 142 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 LHFPL6Q9Y693 200 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 GVINP1Q7Z2Y8 2422 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 MED12Q93074 2177 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 FREM3P0C091 2139 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 C15orf53Q8NAA6 179 aa4.12□□□□□ -1.75
TRAPPC11-209ENST00000512476 ESPL1Q14674 2120 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 FREM2Q5SZK8 3169 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 FAM186AA6NE01 2351 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 NAP1L6A6NFF2 107 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 SAA1P0DJI8 122 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 CAV3P56539 151 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms