RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 Q56UQ5 140 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 FOXI2Q6ZQN5 318 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 BAP18Q8IXM2 172 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 C9orf163Q8N9P6 203 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 OR51A2Q8NGJ7 313 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 DYDC1Q8WWB3 177 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 CNBD2Q96M20 576 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 COMMD5Q9GZQ3 224 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 GABARAPL1Q9H0R8 117 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 OR2D2Q9H210 308 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 ENY2Q9NPA8 101 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 KCNIP2Q9NS61 270 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 RSL24D1Q9UHA3 163 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-208ENST00000511439 TRGV2A0A075B6R0 118 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 A0A1B0GW54 56 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 ATG12O94817 140 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SAA1P0DJI8 122 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SULT1A3P0DMM9 295 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SULT1A4P0DMN0 295 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 CCL1P22362 96 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 ZNF846Q147U1 533 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SS18Q15532 418 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 PIGYQ3MUY2 71 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 LINC01590Q5TEZ4 76 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 GDF5OSQ5U4N7 250 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 DPPA3Q6W0C5 159 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SDIM1Q6ZPB5 146 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 Q6ZQT7 251 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 DAZ4Q86SG3 579 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 OR10K1Q8NGX5 313 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 OR4K15Q8NH41 348 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 GNPDA2Q8TDQ7 276 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM263Q8WUH6 116 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 PYDC1Q8WXC3 89 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 HOPXQ9BPY8 73 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 BIN3Q9NQY0 253 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 PHLDA3Q9Y5J5 127 aa1.75□□□□□ -2.13
TOPBP1-208ENST00000511439 TRBV24-1A0A075B6N3 115 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IGKV1-9A0A0C4DH69 117 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 LOC107986453A0A1B0GWG9 222 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 INMT-MINDY4F8WBC2 141 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IGHV3-30P01768 117 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IGHV3-33P01772 117 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 BPGMP07738 259 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 CTSGP08311 255 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IGHV3-30-3P0DP02 117 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IGHV3-30-5P0DP03 117 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IDO1P14902 403 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 HTN1P15515 57 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 NPPCP23582 126 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 TGFBR1P36897 503 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 RPL5P46777 297 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 DAPP51397 102 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 POLR2JP52435 117 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 HSPE1P61604 102 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 IL15RAQ13261 267 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 LYZL2Q7Z4W2 148 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 GDPD1Q8N9F7 314 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 BPIFB6Q8NFQ5 453 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 OR10A6Q8NH74 314 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 OR13C6PQ8NH95 151 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 HIST1H2BAQ96A08 127 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 RETNLBQ9BQ08 111 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 TXNDC17Q9BRA2 123 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 TSSK6Q9BXA6 273 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 ABRACLQ9P1F3 81 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 PKIGQ9Y2B9 76 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
TOPBP1-208ENST00000511439 FAM236DA0A1B0GTK5 79 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 A8MWP4 228 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 MCRIP1C9JLW8 97 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 SH2D1AO60880 128 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 CRYZL1O95825 349 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 IFNGP01579 166 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 FAM236CP0DP71 79 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 ESDP10768 282 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 CRYBA4P53673 196 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 RBM11P57052 281 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 ARPC4P59998 168 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 PRCDQ00LT1 54 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 MPV17LQ2QL34 196 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 RPL13AP3Q6NVV1 102 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 TOMM20LQ6UXN7 152 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 COX6B2Q6YFQ2 88 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 Q6ZS49 121 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 ANKRD29Q8N6D5 301 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 VSTM2AQ8TAG5 236 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 DIRC1Q969H9 104 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM147Q9BVK8 224 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 CMTM6Q9NX76 183 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 OR52A1Q9UKL2 312 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 R4GMQ9 66 aa1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM56-RWDD3S4R434 201 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms