RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 DOCK1Q14185 1865 aa1.77□□□□□ -2.13
UBE2D3-225ENST00000508476 SIPA1L1O43166 1804 aa1.77□□□□□ -2.13
UBE2D3-225ENST00000508476 WNK1Q9H4A3 2382 aa1.77□□□□□ -2.13
UBE2D3-225ENST00000508476 CNTRLQ7Z7A1 2325 aa1.77□□□□□ -2.13
UBE2D3-225ENST00000508476 SCN1AP35498 2009 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 NUP205Q92621 2012 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 MCM3APO60318 1980 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 PTPRBP23467 1997 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 C2orf16Q68DN1 1984 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 MGAQ8IWI9 3026 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 IGHV3OR16-8A0A075B7F1 116 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 UBE2L5PA0A1B0GUS4 154 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 M0R129 80 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 ATOX1O00244 68 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 GNGT2O14610 69 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 UBL3O95164 117 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 CFDP00746 253 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 NMBP08949 121 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 SAA1P0DJI8 122 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 COX6A1P12074 109 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 PTHLHP12272 177 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 PIPP12273 146 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 NPPCP23582 126 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 CKS2P33552 79 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 UBE2L3P68036 154 aaKnown RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 SP6Q3SY56 376 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 ASB16-AS1Q495Z4 193 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 TMEM256Q8N2U0 113 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 LINC00471Q8N535 108 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 FAM216BQ8N7L0 139 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 OR2T35Q8NGX2 323 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 LINC00467Q9BRT7 94 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 SHANK2-AS3Q9BTD1 123 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 NHP2Q9NX24 153 aaKnown RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 CACFD1Q9UGQ2 172 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 KLK5Q9Y337 293 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 DNAJC15Q9Y5T4 150 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 LINC00312Q9Y6C7 94 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 PKDREJQ9NTG1 2253 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 DOCK6Q96HP0 2047 aa1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 MYH9P35579 1960 aaKnown RBP1.76□□□□□ -2.13
UBE2D3-225ENST00000508476 POLEQ07864 2286 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 RELNP78509 3460 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 NIPBLQ6KC79 2804 aaeCLIP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 IGHV3-49A0A0A0MS15 119 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 IGKV1D-43A0A0B4J1Z2 117 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 A0A0D9SEW6 157 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 IGHV7-4-1A0A0J9YVY3 117 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 OOSP1A8MZH6 123 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 BUB1B-PAK6H3BSN5 160 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SDCBPO00560 298 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 LEPROTO15243 131 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 CREBL2O60519 120 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 IGLV2-8P01709 118 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 MT-ATP8P03928 68 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 INAFM2P0DMQ5 153 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SLC25A6P12236 298 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SLC25A16P16260 332 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 CBLN1P23435 193 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 NFYAP23511 347 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 HLA-DMBP28068 263 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 HINT1P49773 126 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SMIM11AP58511 58 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 BSPH1Q075Z2 132 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 MIC13Q5XKP0 118 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 ZNF322Q6U7Q0 402 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 HEPN1Q6WQI6 88 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 OR5AS1Q8N127 324 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SIGLECL1Q8N7X8 197 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 C1orf64Q8NEQ6 169 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 OR10AG1Q8NH19 301 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 PPDPFLQ8WWR9 84 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 CHCHD7Q9BUK0 85 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 TP73-AS1Q9UF72 201 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 LSM2Q9Y333 95 aaKnown RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SPCS1Q9Y6A9 102 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 THADAQ6YHU6 1953 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 MYH7BA7E2Y1 1941 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 SEC16AO15027 2179 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 PKD1L1Q8TDX9 2849 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 PATJQ8NI35 1801 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 DOCK2Q92608 1830 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 ZNF236Q9UL36 1845 aa1.75□□□□□ -2.13
UBE2D3-225ENST00000508476 NBPF19A0A087WUL8 3843 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 ZNF638Q14966 1978 aaKnown RBP1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 MYH4Q9Y623 1939 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 A0A087WWC5 75 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 IGHV3-21A0A0B4J1V1 117 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 IGHV3-72A0A0B4J1Y9 119 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 MUC21A0A0G2JKD1 596 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 TMEM235A6NFC5 223 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 J3QLW9 94 aa1.74□□□□□ -2.13
UBE2D3-225ENST00000508476 K7ERJ3 54 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms