RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
LINC01340-201ENST00000504012 C20orf203Q8NBC4 194 aa4.4□□□□□ -1.71
LINC01340-201ENST00000504012 LINC00846Q9NV44 126 aa4.4□□□□□ -1.71
LINC01340-201ENST00000504012 PHLDA3Q9Y5J5 127 aa4.4□□□□□ -1.71
LINC01340-201ENST00000504012 TRAV13-2A0A0B4J235 113 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 PLAC8L1A1L4L8 177 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 ERC2-IT1O76042 136 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 Q0VFX4 171 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 C22orf34Q6ZV56 151 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 LY6G5BQ8NDX9 201 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 NPBQ8NG41 125 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 TTTY12Q9BZ98 90 aa4.39□□□□□ -1.71
LINC01340-201ENST00000504012 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 A0A0J9YXV3 536 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 F8W735 103 aaPredicted RBP4.38□□□□□ -1.71
LINC01340-201ENST00000504012 MGPP08493 103 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
LINC01340-201ENST00000504012 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
LINC01340-201ENST00000504012 CDSNQ15517 529 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 WFDC11Q8NEX6 87 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 RNASE6Q93091 150 aaKnown RBP4.38□□□□□ -1.71
LINC01340-201ENST00000504012 ZNRD1Q9P1U0 126 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 KAAG1Q9UBP8 84 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 DSCAMO60469 2012 aa4.38□□□□□ -1.71
LINC01340-201ENST00000504012 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 IGLV1-47P01700 117 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 TRBV12-3P01733 135 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 CTSGP08311 255 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 LINC00528Q8N1L1 170 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 Q8N2B8 174 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 ZFAND2AQ8N6M9 145 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 U3KQE9 123 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 NAV3Q8IVL0 2385 aa4.37□□□□□ -1.71
LINC01340-201ENST00000504012 PRR14LQ5THK1 2151 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 A0A087WVE0 104 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 H3BS24 57 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 NDUFB3O43676 98 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 IGHV1-8P0DP01 117 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
LINC01340-201ENST00000504012 BLCAPP62952 87 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 SPINK14Q6IE38 97 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 FAM19A3Q7Z5A8 133 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
LINC01340-201ENST00000504012 ITLN2Q8WWU7 325 aaPredicted RBP4.36□□□□□ -1.71
LINC01340-201ENST00000504012 LY6G6EA0A0G2JKS1 128 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 BUB1B-PAK6H3BSN5 160 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 SPRY3O43610 288 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 IGHV1-46P01743 117 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 CCL3L1P16619 93 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 RBM3P98179 157 aaKnown RBP4.35□□□□□ -1.71
LINC01340-201ENST00000504012 MSMPQ1L6U9 139 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 VMO1Q7Z5L0 202 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 IL17DQ8TAD2 202 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 U3KQA8 63 aa4.35□□□□□ -1.71
LINC01340-201ENST00000504012 PRRC2AP48634 2157 aaKnown RBP4.35□□□□□ -1.71
LINC01340-201ENST00000504012 PI4KAP42356 2102 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 ASCC3Q8N3C0 2202 aaKnown RBP4.34□□□□□ -1.71
LINC01340-201ENST00000504012 CNTRLQ7Z7A1 2325 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 TRAV12-3A0A0B4J271 114 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 A0A0U1RQV1 116 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 M0QY20 66 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 M0R1B8 84 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 Q6ZSV7 163 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 DEFB108BQ8NET1 73 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 DYNLRB2Q8TF09 96 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 Q9UF83 564 aa4.34□□□□□ -1.71
LINC01340-201ENST00000504012 SDK2Q58EX2 2172 aa4.34□□□□□ -1.72
LINC01340-201ENST00000504012 DOCK10Q96BY6 2186 aa4.34□□□□□ -1.72
LINC01340-201ENST00000504012 F5P12259 2224 aa4.34□□□□□ -1.72
LINC01340-201ENST00000504012 LYRM9A8MSI8 78 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 IGFL4Q6B9Z1 124 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 Q96MF0 132 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
LINC01340-201ENST00000504012 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 ARFGEF3Q5TH69 2177 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 NACAE9PAV3 2078 aa4.33□□□□□ -1.72
LINC01340-201ENST00000504012 ASXL3Q9C0F0 2248 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 IGHV3-64A0A075B6Q5 118 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 TRAV23DV6A0A075B6W5 121 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 IGHV3-72A0A0B4J1Y9 119 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 CLPSL1A2RUU4 121 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 ADARB2-AS1A8MUL3 147 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 F8WEM9 126 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 H3BQ85 93 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms