RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 A0A0D9SG52 128 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 UMAD1C9J7I0 102 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 TMEM262E9PQX1 116 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 M0R036 132 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 M0R381 172 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 ANGP03950 147 aaKnown RBP3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 PRSS1P07477 247 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 UBE2G2P60604 165 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 SMIM12Q96EX1 92 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 ZNF471Q9BX82 626 aaPredicted RBP3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
LSM3P4-201ENST00000502948 TRBV25-1A0A075B6N4 114 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 H7C1H1 209 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 AKR1C3P42330 323 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 RBX1P62877 108 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 ZNF345Q14585 488 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 Q5BKY6 102 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 NTM-AS1Q6ZSK4 140 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 C15orf54Q8N8G6 183 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 OR10AG1Q8NH19 301 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 CYTL1Q9NRR1 136 aa3.91□□□□□ -1.78
LSM3P4-201ENST00000502948 IGHV1-24A0A0C4DH33 117 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 G3V3Q6 166 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 M0QY20 66 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 HLA-DQA1P01909 254 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 SMIM17P0DL12 118 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 REG3AQ06141 175 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 ZNF56Q15929 161 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 SPANXN1Q5VSR9 72 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 FAM210AQ96ND0 272 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 AP1S3Q96PC3 154 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 BATF3Q9NR55 127 aa3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.9□□□□□ -1.79
LSM3P4-201ENST00000502948 TMSB15BA0A087X1C1 80 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 F2Z2F3 143 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 RPS20P60866 119 aaKnown RBP3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 CACNG7P62955 275 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 WDR73Q6P4I2 378 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 BAGE2Q86Y30 109 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 LINC00269Q8N2A0 174 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 DERL1Q9BUN8 251 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
LSM3P4-201ENST00000502948 IGLV10-54A0A075B6I4 117 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 IGHV3-64A0A075B6Q5 118 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 FXYD6-FXYD2A0A087WZ82 144 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 TRAV1-1A0A0B4J248 108 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 HMSDA8MTL9 139 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 F5H697 171 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 H7C423 109 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 LCE2BO14633 110 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 PAGE4O60829 102 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 PFDN1O60925 122 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 TMUB2Q71RG4 321 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 KCNRGQ8N5I3 272 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 C20orf203Q8NBC4 194 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 SPACA4Q8TDM5 124 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 CNFNQ9BYD5 112 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 NIT2Q9NQR4 276 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 AP5S1Q9NUS5 200 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 PKIGQ9Y2B9 76 aa3.88□□□□□ -1.79
LSM3P4-201ENST00000502948 A0A087WYN8 130 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 SCO2A0A1W2PP80 73 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 XKRY2A2RUG3 117 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 C19orf71A6NCJ1 209 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 PANO1I0J062 215 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 ARPC5O15511 151 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 SLPIP03973 132 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 TRGC1P0CF51 173 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 EIF5AP63241 154 aaKnown RBP3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 GAGE6Q13070 117 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 CFAP161Q6P656 301 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 SFT2D1Q8WV19 159 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 LINC01600Q96MT4 127 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 TMEM243Q9BU79 118 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 MANBALQ9NQG1 85 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 BIN3Q9NQY0 253 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 TNXBP22105 4242 aa3.87□□□□□ -1.79
LSM3P4-201ENST00000502948 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 NDUFS6O75380 124 aaKnown RBP3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 NCR2O95944 276 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 H2AFB1P0C5Y9 115 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 RPL35P42766 123 aaKnown RBP3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 RAB5CP51148 216 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 CCL20P78556 96 aa3.86□□□□□ -1.79
LSM3P4-201ENST00000502948 SUMO4Q6EEV6 95 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms