RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TEX43Q6ZNM6 134 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
SPTA1-209ENST00000498708 BPIFA4PQ86YQ2 179 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 LINC00612Q8N6U2 182 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 OR10P1Q8NGE3 313 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BHQ93079 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BNQ99877 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 HIST1H2BMQ99879 126 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 SOSTQ9BQB4 213 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 SLC50A1Q9BRV3 221 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 UPK3BQ9BT76 320 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 SMDT1Q9H4I9 107 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 TNFSF18Q9UNG2 199 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 FUT9Q9Y231 359 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 KLF12Q9Y4X4 402 aa3.75□□□□□ -1.81
SPTA1-209ENST00000498708 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 PIGBOS1A0A0B4J2F0 54 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 MAP1LC3B2A6NCE7 125 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 RNF222A6NCQ9 220 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 H3BQ15 152 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 M0R3E3 92 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 AGPAT2O15120 278 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 HMGB3O15347 200 aaKnown RBP3.74□□□□□ -1.81
SPTA1-209ENST00000498708 MBPP02686 304 aaPredicted RBP3.74□□□□□ -1.81
SPTA1-209ENST00000498708 CXCL2P19875 107 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 EVI2AP22794 236 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 RNASE4P34096 147 aaKnown RBP3.74□□□□□ -1.81
SPTA1-209ENST00000498708 LEPP41159 167 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 S100A10P60903 97 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 SMAGPQ0VAQ4 97 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 LELP1Q5T871 98 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 C10orf113Q5VZT2 155 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 MIC13Q5XKP0 118 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 TMEM14EPQ6UXP3 125 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 Q6ZQT7 251 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 OR5A1Q8NGJ0 315 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 OR10G9Q8NGN4 311 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 TMEM37Q8WXS4 190 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 IMMP2LQ96T52 175 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 MGST2Q99735 147 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 SAMD10Q9BYL1 202 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 MAP1LC3BQ9GZQ8 125 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 UQCR10Q9UDW1 63 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 TP53TG3Q9ULZ0 132 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 RCL1Q9Y2P8 373 aaKnown RBP3.74□□□□□ -1.81
SPTA1-209ENST00000498708 LSM5Q9Y4Y9 91 aaKnown RBP3.74□□□□□ -1.81
SPTA1-209ENST00000498708 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
SPTA1-209ENST00000498708 A0A087WTM6 91 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 C7orf71A4D174 169 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 K7EPK0 472 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 SRIP30626 198 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 INPP1P49441 399 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 C5orf17Q8NAS9 161 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 OR2G3Q8NGZ4 309 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 BLNKQ8WV28 456 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 SLC25A21Q9BQT8 299 aaPredicted RBP3.73□□□□□ -1.81
SPTA1-209ENST00000498708 PYGO2Q9BRQ0 406 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF471Q9BX82 626 aaPredicted RBP3.73□□□□□ -1.81
SPTA1-209ENST00000498708 CTDSP1Q9GZU7 261 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 LAMTOR2Q9Y2Q5 125 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 PXMP4Q9Y6I8 212 aa3.73□□□□□ -1.81
SPTA1-209ENST00000498708 GAGE12JA6NER3 117 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 FAM24AA6NFZ4 105 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 H3BNG1 76 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 J3KT08 172 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF324O75467 553 aaPredicted RBP3.72□□□□□ -1.81
SPTA1-209ENST00000498708 CST7O76096 145 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 SLC25A5P05141 298 aaKnown RBP3.72□□□□□ -1.81
SPTA1-209ENST00000498708 GPX1P07203 203 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 SFTA3P0C7M3 94 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 IGLC2P0DOY2 106 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 PYYP10082 97 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 TCL1AP56279 114 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
SPTA1-209ENST00000498708 ZNF415Q09FC8 603 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 GAGE4Q13068 117 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 DAZ2Q13117 558 aaKnown RBP3.72□□□□□ -1.81
SPTA1-209ENST00000498708 MUC21Q5SSG8 566 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 PRR9Q5T870 116 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 MRPL54Q6P161 138 aaKnown RBP3.72□□□□□ -1.81
SPTA1-209ENST00000498708 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 Q6ZRG5 221 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 WFDC10BQ8IUB3 73 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 EXOC3-AS1Q8N2X6 119 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 C11orf72Q8NBR9 251 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 NDFIP1Q9BT67 221 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 SPANXDQ9BXN6 97 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 AGPAT4-IT1Q9H0P7 198 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 TIMM9Q9Y5J7 89 aa3.72□□□□□ -1.81
SPTA1-209ENST00000498708 IGHV1OR15-1A0A075B7D0 117 aa3.71□□□□□ -1.82
SPTA1-209ENST00000498708 IGKV2-40A0A087WW87 121 aaPredicted RBP3.71□□□□□ -1.82
SPTA1-209ENST00000498708 TRGV4A0A0C4DH28 118 aa3.71□□□□□ -1.82
SPTA1-209ENST00000498708 UBE2L5PA0A1B0GUS4 154 aa3.71□□□□□ -1.82
SPTA1-209ENST00000498708 TINCRA0A1B0GVN0 87 aa3.71□□□□□ -1.82
SPTA1-209ENST00000498708 C7orf77A4D0Y5 90 aa3.71□□□□□ -1.82
SPTA1-209ENST00000498708 FABP5P3A8MUU1 101 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms