RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 SSBP4Q9BWG4 385 aaPredicted RBP16.43■□□□□ 0.22
MKRN1-216ENST00000498535 LRP1Q07954 4544 aaKnown RBP16.43■□□□□ 0.22
MKRN1-216ENST00000498535 G3V3Q6 166 aa16.42■□□□□ 0.22
MKRN1-216ENST00000498535 SNAI2O43623 268 aa16.42■□□□□ 0.22
MKRN1-216ENST00000498535 OR5AL1P0C617 328 aa16.42■□□□□ 0.22
MKRN1-216ENST00000498535 SMIM17P0DL12 118 aa16.42■□□□□ 0.22
MKRN1-216ENST00000498535 SSTP61278 116 aa16.42■□□□□ 0.22
MKRN1-216ENST00000498535 SCO2A0A1W2PP80 73 aa16.41■□□□□ 0.22
MKRN1-216ENST00000498535 RPL37AP61513 92 aaKnown RBP16.41■□□□□ 0.22
MKRN1-216ENST00000498535 DGAT2L7PQ6IED9 249 aa16.41■□□□□ 0.22
MKRN1-216ENST00000498535 FAM213BQ8TBF2 198 aa16.41■□□□□ 0.22
MKRN1-216ENST00000498535 MLST8Q9BVC4 326 aa16.41■□□□□ 0.22
MKRN1-216ENST00000498535 A0A1B0GV50 99 aa16.4■□□□□ 0.22
MKRN1-216ENST00000498535 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
MKRN1-216ENST00000498535 VAX2Q9UIW0 290 aa16.4■□□□□ 0.22
MKRN1-216ENST00000498535 PRSS1P07477 247 aa16.39■□□□□ 0.21
MKRN1-216ENST00000498535 NTM-AS1Q6ZSK4 140 aa16.39■□□□□ 0.21
MKRN1-216ENST00000498535 DERL1Q9BUN8 251 aa16.39■□□□□ 0.21
MKRN1-216ENST00000498535 TRBV25-1A0A075B6N4 114 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 UMAD1C9J7I0 102 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 RBX1P62877 108 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 Q6ZNX1 250 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 LINC00269Q8N2A0 174 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 AP1S3Q96PC3 154 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 PRR34Q9NV39 138 aa16.38■□□□□ 0.21
MKRN1-216ENST00000498535 GAGE6Q13070 117 aa16.37■□□□□ 0.21
MKRN1-216ENST00000498535 CLPSL2Q6UWE3 100 aa16.37■□□□□ 0.21
MKRN1-216ENST00000498535 TMUB2Q71RG4 321 aa16.37■□□□□ 0.21
MKRN1-216ENST00000498535 KCNRGQ8N5I3 272 aa16.36■□□□□ 0.21
MKRN1-216ENST00000498535 C9orf163Q8N9P6 203 aa16.36■□□□□ 0.21
MKRN1-216ENST00000498535 ZNF345Q14585 488 aa16.34■□□□□ 0.21
MKRN1-216ENST00000498535 KIF25-AS1Q9Y6Z4 181 aa16.34■□□□□ 0.21
MKRN1-216ENST00000498535 IGHV1-24A0A0C4DH33 117 aa16.33■□□□□ 0.2
MKRN1-216ENST00000498535 SMLR1H3BR10 107 aa16.33■□□□□ 0.2
MKRN1-216ENST00000498535 H2AFB1P0C5Y9 115 aa16.33■□□□□ 0.2
MKRN1-216ENST00000498535 RPL35P42766 123 aaKnown RBP16.32■□□□□ 0.2
MKRN1-216ENST00000498535 IQCJQ1A5X6 159 aa16.32■□□□□ 0.2
MKRN1-216ENST00000498535 CLRN3Q8NCR9 226 aa16.32■□□□□ 0.2
MKRN1-216ENST00000498535 TPPP3Q9BW30 176 aa16.32■□□□□ 0.2
MKRN1-216ENST00000498535 H7C1H1 209 aa16.31■□□□□ 0.2
MKRN1-216ENST00000498535 MGPP08493 103 aa16.31■□□□□ 0.2
MKRN1-216ENST00000498535 KRTAP26-1Q6PEX3 210 aa16.31■□□□□ 0.2
MKRN1-216ENST00000498535 PLA2G2DQ9UNK4 145 aa16.31■□□□□ 0.2
MKRN1-216ENST00000498535 FAT3Q8TDW7 4589 aa16.31■□□□□ 0.2
MKRN1-216ENST00000498535 REG3AQ06141 175 aa16.3■□□□□ 0.2
MKRN1-216ENST00000498535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.3■□□□□ 0.2
MKRN1-216ENST00000498535 HMCN2Q8NDA2 5059 aa16.3■□□□□ 0.2
MKRN1-216ENST00000498535 KANTRA0A1W2PQU2 76 aa16.29■□□□□ 0.2
MKRN1-216ENST00000498535 HMSDA8MTL9 139 aa16.29■□□□□ 0.2
MKRN1-216ENST00000498535 DAZAP1Q96EP5 407 aaKnown RBP16.29■□□□□ 0.2
MKRN1-216ENST00000498535 IGLV10-54A0A075B6I4 117 aa16.28■□□□□ 0.2
MKRN1-216ENST00000498535 A0A0D9SG52 128 aa16.28■□□□□ 0.2
MKRN1-216ENST00000498535 M0QY20 66 aa16.28■□□□□ 0.2
MKRN1-216ENST00000498535 RPS20P60866 119 aaKnown RBP16.28■□□□□ 0.2
MKRN1-216ENST00000498535 SDIM1Q6ZPB5 146 aa16.28■□□□□ 0.2
MKRN1-216ENST00000498535 FER1L6-AS1Q8NA97 138 aa16.28■□□□□ 0.2
MKRN1-216ENST00000498535 TRAV8-4A0A0B4J246 113 aa16.27■□□□□ 0.2
MKRN1-216ENST00000498535 P01737 135 aa16.27■□□□□ 0.2
MKRN1-216ENST00000498535 GZMBP10144 247 aa16.27■□□□□ 0.2
MKRN1-216ENST00000498535 EIF5AP63241 154 aaKnown RBP16.27■□□□□ 0.2
MKRN1-216ENST00000498535 hDV102S1A0JD36 115 aa16.26■□□□□ 0.19
MKRN1-216ENST00000498535 BCL2L11O43521 198 aa16.26■□□□□ 0.19
MKRN1-216ENST00000498535 HNRNPA3P51991 378 aaKnown RBP16.26■□□□□ 0.19
MKRN1-216ENST00000498535 SUMO4Q6EEV6 95 aa16.26■□□□□ 0.19
MKRN1-216ENST00000498535 MANBALQ9NQG1 85 aa16.26■□□□□ 0.19
MKRN1-216ENST00000498535 CACNG7P62955 275 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 TCTE3Q8IZS6 198 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 OR2D3Q8NGH3 330 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 TMEM243Q9BU79 118 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 AP5S1Q9NUS5 200 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 GNG13Q9P2W3 67 aa16.25■□□□□ 0.19
MKRN1-216ENST00000498535 PANO1I0J062 215 aa16.24■□□□□ 0.19
MKRN1-216ENST00000498535 IGLC6P0CF74 106 aa16.24■□□□□ 0.19
MKRN1-216ENST00000498535 NKX2-5P52952 324 aaPredicted RBP16.24■□□□□ 0.19
MKRN1-216ENST00000498535 CNBPP62633 177 aaKnown RBP16.24■□□□□ 0.19
MKRN1-216ENST00000498535 CENPWQ5EE01 88 aa16.24■□□□□ 0.19
MKRN1-216ENST00000498535 C11orf52Q96A22 123 aa16.24■□□□□ 0.19
MKRN1-216ENST00000498535 DPH3Q96FX2 82 aa16.24■□□□□ 0.19
MKRN1-216ENST00000498535 A0A1B0GUV1 79 aa16.23■□□□□ 0.19
MKRN1-216ENST00000498535 XKRY2A2RUG3 117 aa16.23■□□□□ 0.19
MKRN1-216ENST00000498535 RASL11AQ6T310 242 aa16.23■□□□□ 0.19
MKRN1-216ENST00000498535 C20orf203Q8NBC4 194 aa16.23■□□□□ 0.19
MKRN1-216ENST00000498535 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.22■□□□□ 0.19
MKRN1-216ENST00000498535 PKHD1L1Q86WI1 4243 aa16.22■□□□□ 0.19
MKRN1-216ENST00000498535 IGHV3-64A0A075B6Q5 118 aa16.21■□□□□ 0.19
MKRN1-216ENST00000498535 F2Z2F3 143 aa16.21■□□□□ 0.19
MKRN1-216ENST00000498535 IGLV4-60A0A075B6I1 120 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 UBE2L6O14933 153 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 TRGC1P0CF51 173 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 RAB5CP51148 216 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 CCL20P78556 96 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 NIT2Q9NQR4 276 aa16.2■□□□□ 0.18
MKRN1-216ENST00000498535 hCG_2014768A0A024R1R8 64 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 C19orf71A6NCJ1 209 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 GNG4P50150 75 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 WDR73Q6P4I2 378 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 AKAP14Q86UN6 197 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 SMIM12Q96EX1 92 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 PGLYRP4Q96LB8 373 aa16.19■□□□□ 0.18
MKRN1-216ENST00000498535 TEX46H3BTG2 121 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms