RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 CASC10Q5T4H9 136 aa12.26□□□□□ -0.45
CTDSP1-215ENST00000498160 TMEM136Q6ZRR5 245 aa12.26□□□□□ -0.45
CTDSP1-215ENST00000498160 CBLN2Q8IUK8 224 aa12.26□□□□□ -0.45
CTDSP1-215ENST00000498160 DNAH7Q8WXX0 4024 aa12.26□□□□□ -0.45
CTDSP1-215ENST00000498160 TGIF2-C20orf24A0A0A6YYL0 155 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 CKS2P33552 79 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 ORMDL3Q8N138 153 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 YPEL4Q96NS1 127 aa12.25□□□□□ -0.45
CTDSP1-215ENST00000498160 A0A096LPF7 62 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 TRBV6-5A0A0K0K1A5 114 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 TIRAPP58753 221 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 OR10J3Q5JRS4 329 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 APLNQ9ULZ1 77 aa12.24□□□□□ -0.45
CTDSP1-215ENST00000498160 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 APCSP02743 223 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 P0DMU3 169 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 FAM231AP0DMU4 169 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 FAM231CP0DMU5 169 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 GAGE1Q13065 139 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 GAGE4Q13068 117 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 GAGE5Q13069 117 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
CTDSP1-215ENST00000498160 CCL18P55774 89 aa12.22□□□□□ -0.45
CTDSP1-215ENST00000498160 UBE2D3P61077 147 aa12.22□□□□□ -0.45
CTDSP1-215ENST00000498160 UBE2D2P62837 147 aa12.22□□□□□ -0.45
CTDSP1-215ENST00000498160 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
CTDSP1-215ENST00000498160 ST20Q9HBF5 79 aa12.22□□□□□ -0.45
CTDSP1-215ENST00000498160 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.45
CTDSP1-215ENST00000498160 D6R8Y8 96 aa12.21□□□□□ -0.45
CTDSP1-215ENST00000498160 GTSF1LQ9H1H1 148 aa12.21□□□□□ -0.45
CTDSP1-215ENST00000498160 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.45
CTDSP1-215ENST00000498160 LOC100131303A0A0U1RQF7 123 aa12.2□□□□□ -0.46
CTDSP1-215ENST00000498160 TCAPO15273 167 aa12.2□□□□□ -0.46
CTDSP1-215ENST00000498160 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-215ENST00000498160 PRELID3AQ96N28 172 aa12.2□□□□□ -0.46
CTDSP1-215ENST00000498160 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-215ENST00000498160 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
CTDSP1-215ENST00000498160 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
CTDSP1-215ENST00000498160 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
CTDSP1-215ENST00000498160 SUMO2P61956 95 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-215ENST00000498160 NRACQ8N912 160 aa12.18□□□□□ -0.46
CTDSP1-215ENST00000498160 NCR2O95944 276 aa12.17□□□□□ -0.46
CTDSP1-215ENST00000498160 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-215ENST00000498160 COLCA2A8K830 154 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 I3L3M4 83 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 VCYO14598 125 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 RAB5AP20339 215 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 PKIAP61925 76 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 COTL1Q14019 142 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 LELP1Q5T871 98 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 LGALS9CQ6DKI2 356 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
CTDSP1-215ENST00000498160 TRAV8-6A0A0B4J262 113 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 SCO1O75880 301 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 PMCHP20382 165 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 RPS10P46783 165 aaKnown RBP12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
CTDSP1-215ENST00000498160 DYNC2H1Q8NCM8 4307 aaKnown RBP12.15□□□□□ -0.47
CTDSP1-215ENST00000498160 NPYP01303 97 aa12.14□□□□□ -0.47
CTDSP1-215ENST00000498160 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
CTDSP1-215ENST00000498160 Q9UF83 564 aa12.14□□□□□ -0.47
CTDSP1-215ENST00000498160 K7EMI3 77 aa12.13□□□□□ -0.47
CTDSP1-215ENST00000498160 ESRGQ1W209 222 aa12.13□□□□□ -0.47
CTDSP1-215ENST00000498160 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
CTDSP1-215ENST00000498160 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-215ENST00000498160 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
CTDSP1-215ENST00000498160 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
CTDSP1-215ENST00000498160 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
CTDSP1-215ENST00000498160 ALKBH7Q9BT30 221 aaPredicted RBP12.12□□□□□ -0.47
CTDSP1-215ENST00000498160 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
CTDSP1-215ENST00000498160 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
CTDSP1-215ENST00000498160 IQCJQ1A5X6 159 aa12.11□□□□□ -0.47
CTDSP1-215ENST00000498160 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
CTDSP1-215ENST00000498160 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
CTDSP1-215ENST00000498160 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
CTDSP1-215ENST00000498160 K7EP13 123 aa12.1□□□□□ -0.47
CTDSP1-215ENST00000498160 FCER1GP30273 86 aa12.1□□□□□ -0.47
CTDSP1-215ENST00000498160 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
CTDSP1-215ENST00000498160 LINC00588Q9Y4M8 146 aa12.1□□□□□ -0.47
CTDSP1-215ENST00000498160 H7C423 109 aa12.09□□□□□ -0.47
CTDSP1-215ENST00000498160 G0S2P27469 103 aa12.09□□□□□ -0.47
CTDSP1-215ENST00000498160 AMTP48728 403 aa12.09□□□□□ -0.47
CTDSP1-215ENST00000498160 Q8N8P6 123 aa12.09□□□□□ -0.47
CTDSP1-215ENST00000498160 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms