RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.02■■□□□ 1.764e-17■□□□□ 10.2
CTDSP1-215ENST00000498160 DDX3XO00571 662 aaKnown RBP eCLIP18.5■□□□□ 0.553e-13■■■□□ 17.9
CTDSP1-215ENST00000498160 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.286e-12■■■■■ 82.1
CTDSP1-215ENST00000498160 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.15■□□□□ 0.183e-11■■■■□ 21.4
CTDSP1-215ENST00000498160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.597e-11■■■■■ 260.8
CTDSP1-215ENST00000498160 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.11■□□□□ 0.651e-10■■□□□ 14.2
CTDSP1-215ENST00000498160 EFTUD2Q15029 972 aaKnown RBP eCLIP17.26■□□□□ 0.355e-10■■■■■ 29
CTDSP1-215ENST00000498160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.23■■□□□ 1.953e-9■■■■■ 48.7
CTDSP1-215ENST00000498160 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.64■□□□□ 0.414e-9■■■■■ 393.2
CTDSP1-215ENST00000498160 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.46■□□□□ 0.077e-9■□□□□ 10.4
CTDSP1-215ENST00000498160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.89■■□□□ 1.98e-9■■■■■ 57.5
CTDSP1-215ENST00000498160 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■■■■ 33.1
CTDSP1-215ENST00000498160 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.551e-8■■■□□ 18.5
CTDSP1-215ENST00000498160 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.53■□□□□ 0.43e-8■■■■■ 70.6
CTDSP1-215ENST00000498160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.46□□□□□ -0.095e-8■■■■□ 26.2
CTDSP1-215ENST00000498160 PPIGQ13427 754 aaKnown RBP eCLIP19.29■□□□□ 0.685e-8■■■□□ 15.9
CTDSP1-215ENST00000498160 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.38■□□□□ 0.537e-8■□□□□ 10.4
CTDSP1-215ENST00000498160 SF3B4Q15427 424 aaKnown RBP eCLIP15.91■□□□□ 0.149e-8■■□□□ 12.6
CTDSP1-215ENST00000498160 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.781e-7■□□□□ 11.3
CTDSP1-215ENST00000498160 SMNDC1O75940 238 aaKnown RBP eCLIP15.54■□□□□ 0.083e-7■■■■■ 27.2
CTDSP1-215ENST00000498160 UPF1Q92900 1129 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■□□ 16.6
CTDSP1-215ENST00000498160 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.83■□□□□ 0.65e-7■■■□□ 16
CTDSP1-215ENST00000498160 CDC40O60508 579 aaKnown RBP eCLIP15.97■□□□□ 0.155e-7■■■■□ 22.3
CTDSP1-215ENST00000498160 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.326e-7■■■□□ 18.4
CTDSP1-215ENST00000498160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.79■□□□□ 0.287e-7■■□□□ 12.7
CTDSP1-215ENST00000498160 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.8■□□□□ 0.769e-7■□□□□ 11.3
CTDSP1-215ENST00000498160 FUSP35637 526 aaKnown RBP eCLIP11.27□□□□□ -0.619e-7■□□□□ 9.5
CTDSP1-215ENST00000498160 SF3A3Q12874 501 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■□□ 17.8
CTDSP1-215ENST00000498160 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■□□□ 11.9
CTDSP1-215ENST00000498160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.74■□□□□ 0.911e-6■□□□□ 9.3
CTDSP1-215ENST00000498160 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.4■□□□□ 0.541e-6■■□□□ 13.3
CTDSP1-215ENST00000498160 YBX3P16989 372 aaKnown RBP eCLIP21.52■■□□□ 1.041e-6■□□□□ 10.2
CTDSP1-215ENST00000498160 NCBP2P52298 156 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■□□□ 12
CTDSP1-215ENST00000498160 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■□□ 15.5
CTDSP1-215ENST00000498160 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■■■ 37.4
CTDSP1-215ENST00000498160 FKBP4Q02790 459 aaKnown RBP eCLIP21.61■■□□□ 1.052e-6■■■■■ 27
CTDSP1-215ENST00000498160 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.982e-6■■□□□ 11.9
CTDSP1-215ENST00000498160 PCBP2Q15366 365 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■□□ 18.5
CTDSP1-215ENST00000498160 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.82e-6■■■■□ 25.2
CTDSP1-215ENST00000498160 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.623e-6■■■■■ 90.4
CTDSP1-215ENST00000498160 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■□□□□ 9.2
CTDSP1-215ENST00000498160 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■□□□□ 10
CTDSP1-215ENST00000498160 RBFOX2O43251 390 aaKnown RBP eCLIP14.15□□□□□ -0.145e-6■■■□□ 19.2
CTDSP1-215ENST00000498160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.84■□□□□ 0.935e-6■□□□□ 10.3
CTDSP1-215ENST00000498160 DDX6P26196 483 aaKnown RBP eCLIP18.47■□□□□ 0.555e-6■■■■■ 34.8
CTDSP1-215ENST00000498160 XRCC6P12956 609 aaKnown RBP eCLIP19.69■□□□□ 0.748e-6■□□□□ 10.2
Retrieved 46 of 46 RNA–protein pairs in 9.4 ms