RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 DEFB108BQ8NET1 73 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 DNAJC13O75165 2243 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 ARHGAP32A7KAX9 2087 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-35A0A0C4DH35 117 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 HOXB4P17483 251 aaPredicted RBP3.02□□□□□ -1.93
ATG3-207ENST00000494571 CFHR1Q03591 330 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 PAPPA-AS1Q5QFB9 102 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 ENHOQ6UWT2 76 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 RNF7Q9UBF6 113 aa3.02□□□□□ -1.93
ATG3-207ENST00000494571 LMO7DNF2Z398 122 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 TSHBP01222 138 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 LHBP01229 141 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 LY6G5BQ8NDX9 201 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 MRPL53Q96EL3 112 aaKnown RBP3.01□□□□□ -1.93
ATG3-207ENST00000494571 DSCAMO60469 2012 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 HTTP42858 3142 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 IGKV3D-20A0A0C4DH25 116 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 S100A4P26447 101 aaKnown RBP3.01□□□□□ -1.93
ATG3-207ENST00000494571 GRNP28799 593 aaKnown RBP3.01□□□□□ -1.93
ATG3-207ENST00000494571 DEFB133Q30KQ1 61 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 C9orf129Q5T035 196 aaKnown RBP3.01□□□□□ -1.93
ATG3-207ENST00000494571 DEFB119Q8N690 84 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 ZNF491Q8N8L2 437 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 LINC01600Q96MT4 127 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 UBE2D4Q9Y2X8 147 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 ASXL3Q9C0F0 2248 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 CEP250Q9BV73 2442 aa3.01□□□□□ -1.93
ATG3-207ENST00000494571 TRAV21A0A0B4J279 112 aa3□□□□□ -1.93
ATG3-207ENST00000494571 F5H697 171 aa3□□□□□ -1.93
ATG3-207ENST00000494571 BUB1B-PAK6H3BSN5 160 aa3□□□□□ -1.93
ATG3-207ENST00000494571 LEPROTO15243 131 aa3□□□□□ -1.93
ATG3-207ENST00000494571 RPL27AP46776 148 aaKnown RBP3□□□□□ -1.93
ATG3-207ENST00000494571 RNASE13Q5GAN3 156 aaKnown RBP3□□□□□ -1.93
ATG3-207ENST00000494571 Q6JHZ5 121 aa3□□□□□ -1.93
ATG3-207ENST00000494571 APRG1Q8IVJ8 170 aa3□□□□□ -1.93
ATG3-207ENST00000494571 TMEM61Q8N0U2 210 aa3□□□□□ -1.93
ATG3-207ENST00000494571 NFAM1Q8NET5 270 aaPredicted RBP3□□□□□ -1.93
ATG3-207ENST00000494571 IMMP1LQ96LU5 166 aa3□□□□□ -1.93
ATG3-207ENST00000494571 C11orf68Q9H3H3 251 aaKnown RBP3□□□□□ -1.93
ATG3-207ENST00000494571 NOTCH4Q99466 2003 aa3□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3OR16-13A0A075B7E8 117 aa3□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-74A0A0B4J1X5 117 aa3□□□□□ -1.93
ATG3-207ENST00000494571 TRBV6-1A0A0K0K1D8 114 aa3□□□□□ -1.93
ATG3-207ENST00000494571 BUB3O43684 328 aa3□□□□□ -1.93
ATG3-207ENST00000494571 PRB2P02812 416 aaPredicted RBP3□□□□□ -1.93
ATG3-207ENST00000494571 RFPL3SP0C7P2 107 aa3□□□□□ -1.93
ATG3-207ENST00000494571 TMEM14CQ9P0S9 112 aa3□□□□□ -1.93
ATG3-207ENST00000494571 C11orf21Q9P2W6 132 aa3□□□□□ -1.93
ATG3-207ENST00000494571 Q9UF83 564 aa3□□□□□ -1.93
ATG3-207ENST00000494571 NDUFA12Q9UI09 145 aa3□□□□□ -1.93
ATG3-207ENST00000494571 IGLV3-32A0A0A0MS00 114 aa3□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-66A0A0C4DH42 116 aa3□□□□□ -1.93
ATG3-207ENST00000494571 PRAC2D3DTV9 90 aa3□□□□□ -1.93
ATG3-207ENST00000494571 NCR3O14931 201 aa3□□□□□ -1.93
ATG3-207ENST00000494571 PSPHP1O15172 72 aa3□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-30-3P0DP02 117 aa3□□□□□ -1.93
ATG3-207ENST00000494571 Q8N2B8 174 aa3□□□□□ -1.93
ATG3-207ENST00000494571 COPS9Q8WXC6 57 aa3□□□□□ -1.93
ATG3-207ENST00000494571 FAM218AQ96MZ4 157 aa3□□□□□ -1.93
ATG3-207ENST00000494571 RBM12B-AS1Q9P1G2 102 aa3□□□□□ -1.93
ATG3-207ENST00000494571 COL4A2P08572 1712 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 IGKV1D-17A0A075B6S4 117 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 COX7A2LO14548 114 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-23P01764 117 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 RNASE1P07998 156 aaKnown RBP2.99□□□□□ -1.93
ATG3-207ENST00000494571 DEFB103AP81534 67 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 GGNQ86UU5 652 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 ZNF575Q86XF7 245 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 C6orf223Q8N319 242 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.99□□□□□ -1.93
ATG3-207ENST00000494571 SORL1Q92673 2214 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 PTPRQQ9UMZ3 2332 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 APOC4P55056 127 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 C17orf58Q2M2W7 97 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 CNFNQ9BYD5 112 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 PHLDA3Q9Y5J5 127 aa2.99□□□□□ -1.93
ATG3-207ENST00000494571 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 IGHV1OR15-1A0A075B7D0 117 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 TRBV27A0A0K0K1C4 114 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 IGIPA6NJ69 53 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 H3BRN7 92 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 IGKV1-17P01599 117 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 SLPIP03973 132 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 MIAQ16674 131 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 MSMPQ1L6U9 139 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 ZNF876PQ49A33 203 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 FAM74A4Q5TZK3 123 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 CLEC19AQ6UXS0 136 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 LYPD1Q8N2G4 141 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 FDCSPQ8NFU4 85 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 CXXC4Q9H2H0 198 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 A0A087WWL8 130 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 IGHV3-49A0A0A0MS15 119 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 PLAC8L1A1L4L8 177 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 SPTSSBQ8NFR3 76 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 UBE2E2Q96LR5 201 aa2.98□□□□□ -1.93
ATG3-207ENST00000494571 LITAFQ99732 161 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms