RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SSBP1Q04837 148 aaKnown RBP2.87□□□□□ -1.95
BRCA1-220ENST00000492859 Q6JHZ5 121 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 NDUFA11Q86Y39 141 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 C1orf64Q8NEQ6 169 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 LINC01006Q8NI28 216 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 FAM167A-AS1Q96KT0 104 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 LINC00467Q9BRT7 94 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 CHCHD7Q9BUK0 85 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 CDC42SE1Q9NRR8 79 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 SHPRHQ149N8 1683 aa2.87□□□□□ -1.95
BRCA1-220ENST00000492859 LRP5O75197 1615 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 NRXN3Q9Y4C0 1643 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 LTBP1Q14766 1721 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 TRBV25-1A0A075B6N4 114 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 IGLV3-32A0A0A0MS00 114 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 TRBV10-3A0A0K0K1G6 114 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 TRBV10-2A0A0K0K1G8 114 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 TMEM223A0PJW6 202 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CRPP02741 224 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CLPSP04118 112 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 MSMBP08118 114 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CFC1BP0CG36 223 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CAV3P56539 151 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 Q5VV11 94 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 Q8NBF4 154 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 CIRBP-AS1Q8TBR5 109 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 SIP14410 1827 aa2.86□□□□□ -1.95
BRCA1-220ENST00000492859 SDHAF1A6NFY7 115 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 A6NIN4 97 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 CEBPZOSA8MTT3 80 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 BPY2O14599 106 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 TLX1NBP0CAT3 122 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-220ENST00000492859 IGLV3-21P80748 117 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-220ENST00000492859 MOBPQ13875 183 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 PLGLAQ15195 96 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 LYZL1Q6UWQ5 148 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 ZNF826PQ6ZT77 177 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 LYZL2Q7Z4W2 148 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 DYNAPQ8N1N2 210 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 PSENENQ9NZ42 101 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 ABRACLQ9P1F3 81 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 KDM6BO15054 1643 aa2.85□□□□□ -1.95
BRCA1-220ENST00000492859 MDC1Q14676 2089 aaKnown RBP2.85□□□□□ -1.95
BRCA1-220ENST00000492859 SDK2Q58EX2 2172 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 DDX60LQ5H9U9 1706 aaKnown RBP2.84□□□□□ -1.95
BRCA1-220ENST00000492859 IGHV3-15A0A0B4J1V0 119 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 LEPROTL1O95214 131 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 LHBP01229 141 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 IGHV1-8P0DP01 117 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 IFI27P40305 119 aaPredicted RBP2.84□□□□□ -1.95
BRCA1-220ENST00000492859 FGF22Q9HCT0 170 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 U3KQK5 164 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 CABIN1Q9Y6J0 2220 aa2.84□□□□□ -1.95
BRCA1-220ENST00000492859 RICTORQ6R327 1708 aa2.84□□□□□ -1.96
BRCA1-220ENST00000492859 TIAM2Q8IVF5 1701 aa2.84□□□□□ -1.96
BRCA1-220ENST00000492859 IGHV3-73A0A0B4J1V6 119 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 A6NDX4 124 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 C10orf142B7Z368 130 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 TFF1P04155 84 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 SPINT3P49223 89 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 UBE2D1P51668 147 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 EDDM3BP56851 147 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 GDF5OSQ5U4N7 250 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 Q6ZQT0 140 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 NTM-AS1Q6ZSK4 140 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 CLECL1Q8IZS7 167 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 C15orf56Q8N910 161 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 Q8N9W7 124 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 KLF14Q8TD94 323 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-220ENST00000492859 UBE2D4Q9Y2X8 147 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 DLEC1Q9Y238 1755 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 SPTBP11277 2137 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 SAMD9LQ8IVG5 1584 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 MALRD1Q5VYJ5 2156 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 IGHV1-46P01743 117 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 S100A3P33764 101 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 ATXN8Q156A1 80 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 FAM27BQ5VT28 67 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 CASC2Q6XLA1 102 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 ZNF818PQ6ZRF7 136 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 Q8N1X5 172 aa2.83□□□□□ -1.96
BRCA1-220ENST00000492859 CHKB-CPT1BH3BT56 60 aa2.82□□□□□ -1.96
BRCA1-220ENST00000492859 RPP21Q9H633 154 aaKnown RBP2.82□□□□□ -1.96
BRCA1-220ENST00000492859 S4R3C0 116 aa2.82□□□□□ -1.96
BRCA1-220ENST00000492859 SCN7AQ01118 1682 aa2.82□□□□□ -1.96
BRCA1-220ENST00000492859 NHSL1Q5SYE7 1610 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 LINC01549A6NIU2 74 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 C17orf98A8MV24 154 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 PPYP01298 95 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 PATE4P0C8F1 98 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 NNATQ16517 81 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 Q6ZTC4 211 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 ZNF563Q8TA94 476 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 MUC7Q8TAX7 377 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
BRCA1-220ENST00000492859 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms