RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
VPS8-225ENST00000492449 FHL2Q14192 279 aa7.19□□□□□ -1.26
VPS8-225ENST00000492449 LINC01561Q8N1V8 128 aa7.19□□□□□ -1.26
VPS8-225ENST00000492449 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
VPS8-225ENST00000492449 FREM2Q5SZK8 3169 aa7.19□□□□□ -1.26
VPS8-225ENST00000492449 TRAV12-2A0A075B6T6 113 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 KLK9Q2XQG4 91 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 C10orf105Q8TEF2 133 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 KLK9Q9UKQ9 250 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 ZDBF2Q9HCK1 2354 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 IGLV4-3A0A075B6K6 122 aa7.18□□□□□ -1.26
VPS8-225ENST00000492449 PATE3B3GLJ2 98 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 M0R1W7 72 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 RS1O15537 224 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 NUP37Q8NFH4 326 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 ITLN2Q8WWU7 325 aaPredicted RBP7.17□□□□□ -1.26
VPS8-225ENST00000492449 FAM186AA6NE01 2351 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 CLPSL1A2RUU4 121 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 C20orf203Q8NBC4 194 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 VSIG2Q96IQ7 327 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
VPS8-225ENST00000492449 C1orf43Q9BWL3 253 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 MUC4Q99102 2169 aa7.17□□□□□ -1.26
VPS8-225ENST00000492449 SEC61GP60059 68 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 KLRB1Q12918 225 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 VMO1Q7Z5L0 202 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 C16orf95Q9H693 158 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 CFAP47Q6ZTR5 3102 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 U3KQE9 123 aa7.16□□□□□ -1.26
VPS8-225ENST00000492449 IGHV3-23P01764 117 aa7.15□□□□□ -1.26
VPS8-225ENST00000492449 RPL35AP18077 110 aaKnown RBP7.15□□□□□ -1.26
VPS8-225ENST00000492449 C9orf139Q6ZV77 190 aa7.15□□□□□ -1.26
VPS8-225ENST00000492449 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.26
VPS8-225ENST00000492449 MED13Q9UHV7 2174 aa7.15□□□□□ -1.26
VPS8-225ENST00000492449 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.27
VPS8-225ENST00000492449 FAM236CP0DP71 79 aa7.15□□□□□ -1.27
VPS8-225ENST00000492449 ZNF318Q5VUA4 2279 aa7.15□□□□□ -1.27
VPS8-225ENST00000492449 LPAL2Q16609 132 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 Q8N2B8 174 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 MBD3L2Q8NHZ7 208 aaPredicted RBP7.14□□□□□ -1.27
VPS8-225ENST00000492449 IGF1P05019 195 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 COPS9Q8WXC6 57 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 FAM223BA6NKX1 122 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 FAM104AQ969W3 186 aa7.14□□□□□ -1.27
VPS8-225ENST00000492449 NDUFA1O15239 70 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 DNAL4O96015 105 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 GNRH2O43555 120 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 NDPQ00604 133 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 LINC00308Q8TCZ7 52 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 V9GYY9 64 aa7.13□□□□□ -1.27
VPS8-225ENST00000492449 TRAV12-3A0A0B4J271 114 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 TECTAO75443 2155 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 A0A087WVE0 104 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 IGKV3D-7A0A0C4DH55 119 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 M0QY20 66 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 IGHG2P01859 326 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 OVOL2Q9BRP0 275 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 TMEM243Q9BU79 118 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 NACAE9PAV3 2078 aa7.12□□□□□ -1.27
VPS8-225ENST00000492449 IGHV3OR16-8A0A075B7F1 116 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 BCE1O60756 84 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 LY6G5BQ8NDX9 201 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 FAM110DQ8TAY7 271 aaPredicted RBP7.11□□□□□ -1.27
VPS8-225ENST00000492449 FAM218AQ96MZ4 157 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
VPS8-225ENST00000492449 SEM1Q6ZVN7 128 aa7.11□□□□□ -1.27
VPS8-225ENST00000492449 AHCTF1Q8WYP5 2266 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 CADP27708 2225 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
VPS8-225ENST00000492449 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 IGHV3-66A0A0C4DH42 116 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 CCL17Q92583 94 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 SOCS3O14543 225 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 AVPP01185 164 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1A1P0DJD3 496 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1CP0DJD4 496 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 COX7A1P24310 79 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 XCL1P47992 114 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 RBMY1FQ15415 496 aaKnown RBP7.09□□□□□ -1.27
VPS8-225ENST00000492449 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 IGHV3-35A0A0C4DH35 117 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 F5H697 171 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 H7BZZ5 65 aa7.09□□□□□ -1.27
VPS8-225ENST00000492449 PF4P02776 101 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms