RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.11□□□□□ -0.79
USP39-217ENST00000491659 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
USP39-217ENST00000491659 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
USP39-217ENST00000491659 TRAV8-3A0A0A6YYJ7 113 aa10.1□□□□□ -0.79
USP39-217ENST00000491659 FUSP35637 526 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP39-217ENST00000491659 DAZ4Q86SG3 579 aaKnown RBP10.1□□□□□ -0.79
USP39-217ENST00000491659 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
USP39-217ENST00000491659 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
USP39-217ENST00000491659 DAZ3Q9NR90 486 aaKnown RBP10.1□□□□□ -0.79
USP39-217ENST00000491659 A0A087WX48 190 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 MGPP08493 103 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 NIT1Q86X76 327 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 SVBPQ8N300 66 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
USP39-217ENST00000491659 F2Z2F3 143 aa10.08□□□□□ -0.8
USP39-217ENST00000491659 RMI2Q96E14 147 aa10.08□□□□□ -0.8
USP39-217ENST00000491659 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
USP39-217ENST00000491659 HSPG2P98160 4391 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 H7C1H1 209 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 SNAPINO95295 136 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
USP39-217ENST00000491659 ELOBQ15370 118 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 NTN5Q8WTR8 489 aaPredicted RBP10.07□□□□□ -0.8
USP39-217ENST00000491659 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 RPP21Q9H633 154 aaKnown RBP10.07□□□□□ -0.8
USP39-217ENST00000491659 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
USP39-217ENST00000491659 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
USP39-217ENST00000491659 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 Q8N814 137 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
USP39-217ENST00000491659 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 GCSHP23434 173 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 CTRLP40313 264 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 CEBPGP53567 150 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 PKIAP61925 76 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
USP39-217ENST00000491659 RYR1P21817 5038 aa10.05□□□□□ -0.8
USP39-217ENST00000491659 K7EN84 100 aa10.04□□□□□ -0.8
USP39-217ENST00000491659 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
USP39-217ENST00000491659 CHCHD5Q9BSY4 110 aa10.04□□□□□ -0.8
USP39-217ENST00000491659 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
USP39-217ENST00000491659 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
USP39-217ENST00000491659 CRPP02741 224 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 NTF3P20783 257 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 KRTAP10-1P60331 282 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 SUMO4Q6EEV6 95 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 Q8N1X5 172 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 UBE2WQ96B02 151 aa10.03□□□□□ -0.8
USP39-217ENST00000491659 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
USP39-217ENST00000491659 M0QY20 66 aa10.02□□□□□ -0.81
USP39-217ENST00000491659 Q0VG73 95 aa10.02□□□□□ -0.81
USP39-217ENST00000491659 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
USP39-217ENST00000491659 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
USP39-217ENST00000491659 NDUFS6O75380 124 aaKnown RBP10.01□□□□□ -0.81
USP39-217ENST00000491659 SCO1O75880 301 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 SRP19P09132 144 aaKnown RBP10.01□□□□□ -0.81
USP39-217ENST00000491659 TWIST1Q15672 202 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 RASL11AQ6T310 242 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
USP39-217ENST00000491659 C9JQL5 133 aa10□□□□□ -0.81
USP39-217ENST00000491659 LECT2O14960 151 aa10□□□□□ -0.81
USP39-217ENST00000491659 ANGP03950 147 aaKnown RBP10□□□□□ -0.81
USP39-217ENST00000491659 ADCYAP1P18509 176 aa10□□□□□ -0.81
USP39-217ENST00000491659 FAM231DQ6ZW35 169 aa10□□□□□ -0.81
USP39-217ENST00000491659 C15orf54Q8N8G6 183 aa10□□□□□ -0.81
USP39-217ENST00000491659 SMIM7Q9BQ49 75 aa10□□□□□ -0.81
USP39-217ENST00000491659 C1orf43Q9BWL3 253 aa10□□□□□ -0.81
USP39-217ENST00000491659 IGHV1-24A0A0C4DH33 117 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 WFDC2Q14508 124 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 ATRAIDQ6UW56 229 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 NTM-AS1Q6ZSK4 140 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
USP39-217ENST00000491659 A8MWL6 223 aa9.98□□□□□ -0.81
USP39-217ENST00000491659 GAGE6Q13070 117 aa9.98□□□□□ -0.81
USP39-217ENST00000491659 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
USP39-217ENST00000491659 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
USP39-217ENST00000491659 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
USP39-217ENST00000491659 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.97□□□□□ -0.81
USP39-217ENST00000491659 ZNF727A8MUV8 499 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 XGP55808 180 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 FAM74A3Q4VXF1 159 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 CT83Q5H943 113 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 Q8N976 141 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms