RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PPRC1Q5VV67 1664 aaKnown RBP-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 LRP5O75197 1615 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 TRAV2A0A0B4J234 112 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 TRBV7-6A0A0J9YX20 115 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 MAP1LC3B2A6NCE7 125 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 TMEM14DPA8MWL7 114 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 SPINK4O60575 86 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 HBDP02042 147 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 ACYP2P14621 99 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 CRYGSP22914 178 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 S100A11P31949 105 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 GNG3P63215 75 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 OR8B8Q15620 311 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 DEFB135Q30KP9 77 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 FAM74A4Q5TZK3 123 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 SLC48A1Q6P1K1 146 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 CYP2G1PQ6ZSU1 146 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 STX19Q8N4C7 294 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 TEX29Q8N6K0 151 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 BATF3Q9NR55 127 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 DNAH7Q8WXX0 4024 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 FREM2Q5SZK8 3169 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 ACACBO00763 2458 aa-0.81□□□□□ -2.54
CCDC93-209ENST00000488908 USF3Q68DE3 2245 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 DEFB1P60022 68 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 BASP1P80723 227 aaKnown RBP-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 TMED4Q7Z7H5 227 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 C4orf33Q8N1A6 199 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 LYSTQ99698 3801 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 TAS2R8Q9NYW2 309 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 VPS13BQ7Z7G8 4022 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 MYH3P11055 1940 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 CSMD1Q96PZ7 3565 aa-0.82□□□□□ -2.54
CCDC93-209ENST00000488908 AKAP11Q9UKA4 1901 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 PLCE1Q9P212 2302 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 PLXNA1Q9UIW2 1896 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 ZNF142P52746 1687 aaPredicted RBP-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 H0YGG7 62 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 PFDN1O60925 122 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 CCL3L1P16619 93 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 AKR1D1P51857 326 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 PCBD1P61457 104 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 MT1XP80297 61 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 MRPS15P82914 257 aaKnown RBP-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 OR2T2Q6IF00 324 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 BRK1Q8WUW1 75 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 AGPAT4-IT1Q9H0P7 198 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 FXYD6Q9H0Q3 95 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 V9GYV3 84 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 WDR97A6NE52 1622 aa-0.83□□□□□ -2.54
CCDC93-209ENST00000488908 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 TRAV22A0A0B4J277 110 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 H0YAA0 97 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 H3BNG1 76 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 APOC4-APOC2K7ER74 178 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 UQCRQO14949 82 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 DEGS1O15121 323 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 PIN1P1O15428 100 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 FAM107AO95990 144 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 PLGLB1Q02325 96 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 KRTAP19-6Q3LI70 58 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 DCUN1D2Q6PH85 259 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 MYO7BQ6PIF6 2116 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 SLC25A26Q70HW3 274 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 SMIM20Q8N5G0 67 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 CCDC32Q9BV29 185 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 UFC1Q9Y3C8 167 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 DNAJC13O75165 2243 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 PLXNA2O75051 1894 aa-0.84□□□□□ -2.54
CCDC93-209ENST00000488908 A2MP01023 1474 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 FAM186AA6NE01 2351 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 FXYD6-FXYD2A0A087WZ82 144 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 TRBV10-3A0A0K0K1G6 114 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 PPP5D1E7EU14 171 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 MT1BP07438 61 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 RPL22P35268 128 aaKnown RBP-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 CRYBA4P53673 196 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 COX7B2Q8TF08 81 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 CBLN4Q9NTU7 201 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 BICRAQ9NZM4 1560 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 METTL1Q9UBP6 276 aaKnown RBP-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 STOML2Q9UJZ1 356 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 ERG28Q9UKR5 140 aa-0.85□□□□□ -2.55
CCDC93-209ENST00000488908 BCL9LQ86UU0 1499 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 CCDC171Q6TFL3 1326 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 FER1L6Q2WGJ9 1857 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 TRGV1A0A0A0MS02 117 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 LOC107984640A0A0U1RRK4 108 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 TFF1P04155 84 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 HIST1H1BP16401 226 aaKnown RBP-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 HSD17B12Q53GQ0 312 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 NDUFAF1Q9Y375 327 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 MED31Q9Y3C7 131 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 MYO15AQ9UKN7 3530 aa-0.86□□□□□ -2.55
CCDC93-209ENST00000488908 KIF13AQ9H1H9 1805 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 RANBP2P49792 3224 aaKnown RBP-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 M0QZK8 103 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 SERPINB1P30740 379 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 C3orf33Q6P1S2 294 aa-0.87□□□□□ -2.55
CCDC93-209ENST00000488908 IFI27L1Q96BM0 104 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms