RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 C15orf54Q8N8G6 183 aa16.82■□□□□ 0.28
HLA-F-227ENST00000485513 CRPP02741 224 aa16.81■□□□□ 0.28
HLA-F-227ENST00000485513 MPV17L2Q567V2 206 aa16.81■□□□□ 0.28
HLA-F-227ENST00000485513 ENHOQ6UWT2 76 aa16.81■□□□□ 0.28
HLA-F-227ENST00000485513 SCXQ7RTU7 201 aa16.81■□□□□ 0.28
HLA-F-227ENST00000485513 CHCHD5Q9BSY4 110 aa16.81■□□□□ 0.28
HLA-F-227ENST00000485513 SMIM17P0DL12 118 aa16.8■□□□□ 0.28
HLA-F-227ENST00000485513 MANBALQ9NQG1 85 aa16.8■□□□□ 0.28
HLA-F-227ENST00000485513 GNG13Q9P2W3 67 aa16.8■□□□□ 0.28
HLA-F-227ENST00000485513 ANGP03950 147 aaKnown RBP16.79■□□□□ 0.28
HLA-F-227ENST00000485513 PKIAP61925 76 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 C14orf177Q52M58 125 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 C11orf52Q96A22 123 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 AP1S3Q96PC3 154 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 DERL1Q9BUN8 251 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 KIF25-AS1Q9Y6Z4 181 aa16.79■□□□□ 0.28
HLA-F-227ENST00000485513 CCL20P78556 96 aa16.78■□□□□ 0.28
HLA-F-227ENST00000485513 TMEM97Q5BJF2 176 aa16.78■□□□□ 0.28
HLA-F-227ENST00000485513 CHAC1Q9BUX1 264 aa16.77■□□□□ 0.28
HLA-F-227ENST00000485513 VAX2Q9UIW0 290 aa16.77■□□□□ 0.28
HLA-F-227ENST00000485513 J3QL48 77 aa16.76■□□□□ 0.27
HLA-F-227ENST00000485513 NTM-AS1Q6ZSK4 140 aa16.76■□□□□ 0.27
HLA-F-227ENST00000485513 TRAV1-1A0A0B4J248 108 aa16.75■□□□□ 0.27
HLA-F-227ENST00000485513 CENPWQ5EE01 88 aa16.75■□□□□ 0.27
HLA-F-227ENST00000485513 GZMBP10144 247 aa16.74■□□□□ 0.27
HLA-F-227ENST00000485513 DAZAP1Q96EP5 407 aaKnown RBP16.74■□□□□ 0.27
HLA-F-227ENST00000485513 TPPP3Q9BW30 176 aa16.74■□□□□ 0.27
HLA-F-227ENST00000485513 RAB5CP51148 216 aa16.73■□□□□ 0.27
HLA-F-227ENST00000485513 RPS20P60866 119 aaKnown RBP16.73■□□□□ 0.27
HLA-F-227ENST00000485513 MIAQ16674 131 aa16.73■□□□□ 0.27
HLA-F-227ENST00000485513 FER1L6-AS1Q8NA97 138 aa16.73■□□□□ 0.27
HLA-F-227ENST00000485513 DEFB104AQ8WTQ1 72 aa16.73■□□□□ 0.27
HLA-F-227ENST00000485513 TRBV25-1A0A075B6N4 114 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 IGLV2-8P01709 118 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 HLA-DQA1P01909 254 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 IGLC6P0CF74 106 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 OR2D3Q8NGH3 330 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 CIRBP-AS1Q8TBR5 109 aa16.72■□□□□ 0.27
HLA-F-227ENST00000485513 USP17L23D6RBM5 183 aa16.71■□□□□ 0.27
HLA-F-227ENST00000485513 TEX46H3BTG2 121 aa16.71■□□□□ 0.27
HLA-F-227ENST00000485513 MGPP08493 103 aa16.71■□□□□ 0.27
HLA-F-227ENST00000485513 RBX1P62877 108 aa16.71■□□□□ 0.27
HLA-F-227ENST00000485513 GAGE6Q13070 117 aa16.71■□□□□ 0.27
HLA-F-227ENST00000485513 EIF5AL1Q6IS14 154 aaKnown RBP16.71■□□□□ 0.27
HLA-F-227ENST00000485513 C19orf71A6NCJ1 209 aa16.7■□□□□ 0.26
HLA-F-227ENST00000485513 PRR34Q9NV39 138 aa16.7■□□□□ 0.26
HLA-F-227ENST00000485513 RAB19A4D1S5 217 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 H7C1H1 209 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 M0QY20 66 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 GNG4P50150 75 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 CACNG7P62955 275 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 IQCJQ1A5X6 159 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 CLPSL2Q6UWE3 100 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 SMIM12Q96EX1 92 aa16.69■□□□□ 0.26
HLA-F-227ENST00000485513 IGHV1-24A0A0C4DH33 117 aa16.68■□□□□ 0.26
HLA-F-227ENST00000485513 LINC00269Q8N2A0 174 aa16.68■□□□□ 0.26
HLA-F-227ENST00000485513 XKRY2A2RUG3 117 aa16.67■□□□□ 0.26
HLA-F-227ENST00000485513 KRTAP29-1A8MX34 341 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-227ENST00000485513 SULT1A2P50226 295 aa16.67■□□□□ 0.26
HLA-F-227ENST00000485513 MEF2BQ02080 365 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-227ENST00000485513 SUMO4Q6EEV6 95 aa16.67■□□□□ 0.26
HLA-F-227ENST00000485513 PDE6DO43924 150 aa16.66■□□□□ 0.26
HLA-F-227ENST00000485513 P01737 135 aa16.66■□□□□ 0.26
HLA-F-227ENST00000485513 F2Z2F3 143 aa16.65■□□□□ 0.26
HLA-F-227ENST00000485513 IFNA1P01562 189 aa16.65■□□□□ 0.26
HLA-F-227ENST00000485513 PRSS1P07477 247 aa16.65■□□□□ 0.26
HLA-F-227ENST00000485513 KRTAP10-4P60372 401 aaPredicted RBP16.64■□□□□ 0.25
HLA-F-227ENST00000485513 KRTAP26-1Q6PEX3 210 aa16.64■□□□□ 0.25
HLA-F-227ENST00000485513 MED9Q9NWA0 146 aa16.64■□□□□ 0.25
HLA-F-227ENST00000485513 TRBV20OR9-2A0A075B6H5 130 aa16.63■□□□□ 0.25
HLA-F-227ENST00000485513 TRGC1P0CF51 173 aa16.63■□□□□ 0.25
HLA-F-227ENST00000485513 NKX2-5P52952 324 aaPredicted RBP16.63■□□□□ 0.25
HLA-F-227ENST00000485513 DGAT2L7PQ6IED9 249 aa16.63■□□□□ 0.25
HLA-F-227ENST00000485513 RASL11AQ6T310 242 aa16.63■□□□□ 0.25
HLA-F-227ENST00000485513 BIN3Q9NQY0 253 aa16.63■□□□□ 0.25
HLA-F-227ENST00000485513 LYZL1Q6UWQ5 148 aa16.62■□□□□ 0.25
HLA-F-227ENST00000485513 BCL2P10415 239 aa16.61■□□□□ 0.25
HLA-F-227ENST00000485513 REG3AQ06141 175 aa16.61■□□□□ 0.25
HLA-F-227ENST00000485513 TMEM243Q9BU79 118 aa16.61■□□□□ 0.25
HLA-F-227ENST00000485513 C9orf163Q8N9P6 203 aa16.6■□□□□ 0.25
HLA-F-227ENST00000485513 DPH3P1Q9H4G8 78 aa16.6■□□□□ 0.25
HLA-F-227ENST00000485513 IGLV10-54A0A075B6I4 117 aa16.59■□□□□ 0.25
HLA-F-227ENST00000485513 NTF3P20783 257 aa16.59■□□□□ 0.25
HLA-F-227ENST00000485513 C20orf203Q8NBC4 194 aa16.59■□□□□ 0.25
HLA-F-227ENST00000485513 NIT2Q9NQR4 276 aa16.59■□□□□ 0.25
HLA-F-227ENST00000485513 C9orf62Q8N4C0 152 aa16.58■□□□□ 0.24
HLA-F-227ENST00000485513 A0A1B0GUV1 79 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 WDR73Q6P4I2 378 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 SLC51BQ86UW2 128 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 TCTE3Q8IZS6 198 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 CLRN3Q8NCR9 226 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 NUDT10Q8NFP7 164 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 NUDT11Q96G61 164 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 PGLYRP4Q96LB8 373 aa16.57■□□□□ 0.24
HLA-F-227ENST00000485513 IGLV4-60A0A075B6I1 120 aa16.56■□□□□ 0.24
HLA-F-227ENST00000485513 TRAV8-4A0A0B4J246 113 aa16.56■□□□□ 0.24
HLA-F-227ENST00000485513 CTRLP40313 264 aa16.56■□□□□ 0.24
HLA-F-227ENST00000485513 TAGLN2P37802 199 aaKnown RBP16.55■□□□□ 0.24
HLA-F-227ENST00000485513 UBE2L6O14933 153 aa16.53■□□□□ 0.24
HLA-F-227ENST00000485513 RPL37AP61513 92 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms