RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
MSH5-216ENST00000484309 CACNG7P62955 275 aa8.2□□□□□ -1.1
MSH5-216ENST00000484309 LAGE3Q14657 143 aa8.2□□□□□ -1.1
MSH5-216ENST00000484309 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
MSH5-216ENST00000484309 RPP21Q9H633 154 aaKnown RBP8.2□□□□□ -1.1
MSH5-216ENST00000484309 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
MSH5-216ENST00000484309 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 KLK12Q9UKR0 248 aa8.19□□□□□ -1.1
MSH5-216ENST00000484309 A0A087WX48 190 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 F2Z2F3 143 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 LECT2O14960 151 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 NTF3P20783 257 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 CTRLP40313 264 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 WFDC2Q14508 124 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
MSH5-216ENST00000484309 TRBV6-8A0A0A6YYG3 113 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 TRAV8-3A0A0A6YYJ7 113 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 M0QY20 66 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 GATCO43716 136 aaKnown RBP8.17□□□□□ -1.1
MSH5-216ENST00000484309 TRGC1P0CF51 173 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 TWIST1Q15672 202 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 UBE2WQ96B02 151 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 SMIM7Q9BQ49 75 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 CHCHD5Q9BSY4 110 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 TM2D2Q9BX73 214 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
MSH5-216ENST00000484309 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
MSH5-216ENST00000484309 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
MSH5-216ENST00000484309 NTM-AS1Q6ZSK4 140 aa8.16□□□□□ -1.1
MSH5-216ENST00000484309 Q8N814 137 aa8.16□□□□□ -1.1
MSH5-216ENST00000484309 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.16□□□□□ -1.1
MSH5-216ENST00000484309 GTSF1Q8WW33 167 aa8.16□□□□□ -1.1
MSH5-216ENST00000484309 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 ZNF727A8MUV8 499 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 H7C1H1 209 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 GAGE6Q13070 117 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 C15orf54Q8N8G6 183 aa8.15□□□□□ -1.1
MSH5-216ENST00000484309 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 GCSHP23434 173 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
MSH5-216ENST00000484309 RASL11AQ6T310 242 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 FAM231DQ6ZW35 169 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 Q8N976 141 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 PGLYRP4Q96LB8 373 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 CHCHD7Q9BUK0 85 aa8.14□□□□□ -1.11
MSH5-216ENST00000484309 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.13□□□□□ -1.11
MSH5-216ENST00000484309 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
MSH5-216ENST00000484309 HAMPP81172 84 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 ELOBQ15370 118 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 ATRAIDQ6UW56 229 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 CLPSL2Q6UWE3 100 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 RMI2Q96E14 147 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 CNFNQ9BYD5 112 aa8.13□□□□□ -1.11
MSH5-216ENST00000484309 TRBV25-1A0A075B6N4 114 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 A8MWL6 223 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 CRPP02741 224 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 TMEM97Q5BJF2 176 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 NIT2Q9NQR4 276 aa8.12□□□□□ -1.11
MSH5-216ENST00000484309 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 C9JQL5 133 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 XGP55808 180 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
MSH5-216ENST00000484309 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 Q8N1X5 172 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 GATD1Q8NB37 220 aa8.11□□□□□ -1.11
MSH5-216ENST00000484309 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
MSH5-216ENST00000484309 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
MSH5-216ENST00000484309 RBX1P62877 108 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 CT83Q5H943 113 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 C1orf43Q9BWL3 253 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 COX11Q9Y6N1 276 aa8.1□□□□□ -1.11
MSH5-216ENST00000484309 NDUFS6O75380 124 aaKnown RBP8.09□□□□□ -1.11
MSH5-216ENST00000484309 HLA-DQA1P01909 254 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 PKIAP61925 76 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 Q0VG73 95 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 ADIRFQ15847 76 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 BORCS7Q96B45 105 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 TMEM243Q9BU79 118 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 OSTCQ9NRP0 149 aa8.09□□□□□ -1.11
MSH5-216ENST00000484309 HIGD1CA8MV81 97 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 AMTP48728 403 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms