RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TMEM241Q24JQ0 296 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 GDF5OSQ5U4N7 250 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 LAMTOR1Q6IAA8 161 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 B9D2Q9BPU9 175 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 GGACTQ9BVM4 153 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 NPCDR1Q9BY65 106 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 WDR61Q9GZS3 305 aaKnown RBP2.62□□□□□ -1.99
UPF3A-207ENST00000481131 SLC25A31Q9H0C2 315 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 SH3BGRL3Q9H299 93 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 SLC39A9Q9NUM3 307 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF492Q9P255 531 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 HIGD1AQ9Y241 93 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 PXMP4Q9Y6I8 212 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 DNAH7Q8WXX0 4024 aa2.62□□□□□ -1.99
UPF3A-207ENST00000481131 TRAV8-2A0A0B4J237 113 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 ARPC5O15511 151 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 HYPMO75409 117 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 FABP1P07148 127 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF705DP0CH99 300 aaPredicted RBP2.61□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF705BP0CI00 300 aaPredicted RBP2.61□□□□□ -1.99
UPF3A-207ENST00000481131 PYYP10082 97 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 CXCL2P19875 107 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 RAB2AP61019 212 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 FLI1Q01543 452 aaPredicted RBP2.61□□□□□ -1.99
UPF3A-207ENST00000481131 PSMG4Q5JS54 123 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 C10orf113Q5VZT2 155 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 RPL7L1Q6DKI1 246 aaKnown RBP2.61□□□□□ -1.99
UPF3A-207ENST00000481131 LINC00322Q6ZN03 302 aaPredicted RBP2.61□□□□□ -1.99
UPF3A-207ENST00000481131 MIR17HGQ75NE6 70 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 SSX7Q7RTT5 188 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 LINC00305Q7Z4B0 112 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 AQP10Q96PS8 301 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 TUBA4BQ9H853 241 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 STAB2Q8WWQ8 2551 aa2.61□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF705FA8MVS1 300 aaPredicted RBP2.6□□□□□ -1.99
UPF3A-207ENST00000481131 H3BQ15 152 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 HMGB3O15347 200 aaKnown RBP2.6□□□□□ -1.99
UPF3A-207ENST00000481131 CFDP00746 253 aaPredicted RBP2.6□□□□□ -1.99
UPF3A-207ENST00000481131 IFNA5P01569 189 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 OR10J4P0C629 311 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 ATP6V0CP27449 155 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 FXYD7P58549 80 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 RAB31Q13636 194 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 DEFB135Q30KP9 77 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 C1orf194Q5T5A4 169 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 FAM78BQ5VT40 261 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 FAM167A-AS1Q96KT0 104 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 LINC00052Q96N35 136 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 TM2D3Q9BRN9 247 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF586Q9NXT0 402 aa2.6□□□□□ -1.99
UPF3A-207ENST00000481131 CSMD3Q7Z407 3707 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 TRAV2A0A0B4J234 112 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 A0A0J9YX75 114 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 IGLL5B9A064 214 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 M0R3E3 92 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 IGLC2P0DOY2 106 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 RPL7P18124 248 aaKnown RBP2.59□□□□□ -1.99
UPF3A-207ENST00000481131 PSMB3P49720 205 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 NKX2-5P52952 324 aaPredicted RBP2.59□□□□□ -1.99
UPF3A-207ENST00000481131 AKAP14Q86UN6 197 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 BPIFA4PQ86YQ2 179 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 TCTE3Q8IZS6 198 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 KCNRGQ8N5I3 272 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 ZNF738Q8NE65 137 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 SCGB1C1Q8TD33 95 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 ASB13Q8WXK3 278 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 PFDN5Q99471 154 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 PARD6GQ9BYG4 376 aaPredicted RBP2.59□□□□□ -1.99
UPF3A-207ENST00000481131 SLC35B3Q9H1N7 401 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 FUT9Q9Y231 359 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 R4GN34 69 aa2.59□□□□□ -1.99
UPF3A-207ENST00000481131 TRBV19A0A075B6N1 114 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 IGKV2-40A0A087WW87 121 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 BORCS7-ASMTA0A0B4J1R7 106 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 HMSDA8MTL9 139 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 H3BMM0 161 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 M0R2Z0 102 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 DEFB4AO15263 64 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 IGKV2D-40P01614 121 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 C1QBP02746 253 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 ARL14EPLP0DKL9 152 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 HLA-DRB4P13762 266 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 TSPOP30536 169 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 CDC34P49427 236 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 SNRPD3P62318 126 aaKnown RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 RHOBP62745 196 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 UBE2L3P68036 154 aaKnown RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 HIST1H1AQ02539 215 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 ZNF345Q14585 488 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 LGALSLQ3ZCW2 172 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 LCN15Q6UWW0 184 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 AMTNQ6UX39 209 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 FOXI2Q6ZQN5 318 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms