RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 LINC00477Q96M19 166 aa3.68□□□□□ -1.82
COMMD3-212ENST00000479958 TPPP3Q9BW30 176 aa3.68□□□□□ -1.82
COMMD3-212ENST00000479958 BIN3Q9NQY0 253 aa3.68□□□□□ -1.82
COMMD3-212ENST00000479958 NAT8BQ9UHF3 227 aa3.68□□□□□ -1.82
COMMD3-212ENST00000479958 ATRQ13535 2644 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 TRAV12-2A0A075B6T6 113 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 XKRY2A2RUG3 117 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 FBLL1A6NHQ2 334 aaKnown RBP3.67□□□□□ -1.82
COMMD3-212ENST00000479958 FABP5P3A8MUU1 101 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 M0R2Z0 102 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 GNRH2O43555 120 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 IQCJQ1A5X6 159 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 AMTNQ6UX39 209 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 DYNLRB2Q8TF09 96 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 GNB1LQ9BYB4 327 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 Q9UF83 564 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 NAGKQ9UJ70 344 aa3.67□□□□□ -1.82
COMMD3-212ENST00000479958 TIMM8BQ9Y5J9 83 aaPredicted RBP3.67□□□□□ -1.82
COMMD3-212ENST00000479958 FBN1P35555 2871 aaKnown RBP3.67□□□□□ -1.82
COMMD3-212ENST00000479958 TRAV12-3A0A0B4J271 114 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 A0A1B0GUT8 65 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 APCSP02743 223 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 GPX1P07203 203 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 RBMY1A1P0DJD3 496 aaKnown RBP3.66□□□□□ -1.82
COMMD3-212ENST00000479958 RBMY1CP0DJD4 496 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 CRISP2P16562 243 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 BMI1P35226 326 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
COMMD3-212ENST00000479958 RBMY1FQ15415 496 aaKnown RBP3.66□□□□□ -1.82
COMMD3-212ENST00000479958 SPINK13Q1W4C9 94 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 WFDC10AQ9H1F0 79 aa3.66□□□□□ -1.82
COMMD3-212ENST00000479958 A4D1N5 150 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 FAM231BA6NCW3 169 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 SMKR1H3BMG3 65 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 H3BMM0 161 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 H3BVH4 76 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 ZNF324O75467 553 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-212ENST00000479958 S100A6P06703 90 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 SRIP30626 198 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 CTRLP40313 264 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 AKR1D1P51857 326 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 PAFAH1B2P68402 229 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 HBBP68871 147 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 EBLN2Q6P2I7 272 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 FOXI2Q6ZQN5 318 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 NDUFA11Q86Y39 141 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 FER1L6-AS1Q8NA97 138 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 OR10AG1Q8NH19 301 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 LENEPQ9Y5L5 61 aa3.65□□□□□ -1.83
COMMD3-212ENST00000479958 LOC102724200A0A096LPH7 203 aaPredicted RBP3.64□□□□□ -1.83
COMMD3-212ENST00000479958 TRAV2A0A0B4J234 112 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 C7orf71A4D174 169 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 A8MTW9 85 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
COMMD3-212ENST00000479958 SERF1AO75920 110 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 IGLV1-51P01701 117 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 HLA-DQA1P01909 254 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 CD7P09564 240 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 GIG44P09565 113 aaPredicted RBP3.64□□□□□ -1.83
COMMD3-212ENST00000479958 NTF3P20783 257 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 LEPP41159 167 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 RPS20P60866 119 aaKnown RBP3.64□□□□□ -1.83
COMMD3-212ENST00000479958 COA6Q5JTJ3 125 aaKnown RBP3.64□□□□□ -1.83
COMMD3-212ENST00000479958 Q6AWC8 147 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 ATP5L2Q7Z4Y8 100 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 AMN1Q8IY45 258 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 RNF185Q96GF1 192 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 MUC4Q99102 2169 aa3.64□□□□□ -1.83
COMMD3-212ENST00000479958 CMYA5Q8N3K9 4069 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 TRAV25A0A0B4J276 109 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 TRAV21A0A0B4J279 112 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 OR4C46A6NHA9 309 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 DUSP14O95147 198 aaKnown RBP3.63□□□□□ -1.83
COMMD3-212ENST00000479958 NCR2O95944 276 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 MT-ND6P03923 174 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
COMMD3-212ENST00000479958 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 FABP4P15090 132 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
COMMD3-212ENST00000479958 SAMD13Q5VXD3 122 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 RASL11AQ6T310 242 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 C18orf32Q8TCD1 76 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 HIST1H2BLQ99880 126 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 SPAG8Q99932 426 aaPredicted RBP3.63□□□□□ -1.83
COMMD3-212ENST00000479958 CITED1Q99966 193 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 SIGLEC8Q9NYZ4 499 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 MAST4O15021 2626 aa3.63□□□□□ -1.83
COMMD3-212ENST00000479958 STAB1Q9NY15 2570 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 TRBV7-9A0A0J9YWB2 115 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 M0R381 172 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 SNAI2O43623 268 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 HTN1P15515 57 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 EVI2AP22794 236 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 Q0VG73 95 aa3.62□□□□□ -1.83
COMMD3-212ENST00000479958 COX19Q49B96 90 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms