RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
PKP4-209ENST00000479398 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
PKP4-209ENST00000479398 Q9HAA7 133 aa13.89□□□□□ -0.19
PKP4-209ENST00000479398 DAZ3Q9NR90 486 aaKnown RBP13.89□□□□□ -0.19
PKP4-209ENST00000479398 PGPEP1Q9NXJ5 209 aa13.89□□□□□ -0.19
PKP4-209ENST00000479398 TRBV6-8A0A0A6YYG3 113 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 A8MWL6 223 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 M0QY20 66 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 LAGE3Q14657 143 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 TWIST1Q15672 202 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 LINC01551Q86U37 167 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.88□□□□□ -0.19
PKP4-209ENST00000479398 DPH3P1Q9H4G8 78 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 URGCP-MRPS24S4R325 110 aa13.88□□□□□ -0.19
PKP4-209ENST00000479398 H7C1H1 209 aa13.87□□□□□ -0.19
PKP4-209ENST00000479398 PSCAO43653 123 aa13.87□□□□□ -0.19
PKP4-209ENST00000479398 SUMO4Q6EEV6 95 aa13.87□□□□□ -0.19
PKP4-209ENST00000479398 DNAJC30Q96LL9 226 aa13.87□□□□□ -0.19
PKP4-209ENST00000479398 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
PKP4-209ENST00000479398 TRAV8-3A0A0A6YYJ7 113 aa13.85□□□□□ -0.19
PKP4-209ENST00000479398 FOXA3P55318 350 aaPredicted RBP13.85□□□□□ -0.19
PKP4-209ENST00000479398 A0A087WX48 190 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 C9JQL5 133 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 PEA15Q15121 130 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 FAM74A3Q4VXF1 159 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 TMEM97Q5BJF2 176 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 CT83Q5H943 113 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 RASL11AQ6T310 242 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 CHCHD7Q9BUK0 85 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 TM2D2Q9BX73 214 aa13.84□□□□□ -0.19
PKP4-209ENST00000479398 LRCOL1A6NCL2 159 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 KCNIP4Q6PIL6 250 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 NTM-AS1Q6ZSK4 140 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 PGLYRP4Q96LB8 373 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 SMDT1Q9H4I9 107 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 OSTCQ9NRP0 149 aa13.83□□□□□ -0.2
PKP4-209ENST00000479398 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
PKP4-209ENST00000479398 ELOBQ15370 118 aa13.82□□□□□ -0.2
PKP4-209ENST00000479398 NIT2Q9NQR4 276 aa13.82□□□□□ -0.2
PKP4-209ENST00000479398 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
PKP4-209ENST00000479398 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
PKP4-209ENST00000479398 CDPF1Q6NVV7 123 aa13.81□□□□□ -0.2
PKP4-209ENST00000479398 TSKUQ8WUA8 353 aa13.81□□□□□ -0.2
PKP4-209ENST00000479398 SMIM15Q7Z3B0 74 aa13.8□□□□□ -0.2
PKP4-209ENST00000479398 CHCHD5Q9BSY4 110 aa13.8□□□□□ -0.2
PKP4-209ENST00000479398 GFRA4Q9GZZ7 299 aa13.8□□□□□ -0.2
PKP4-209ENST00000479398 HERC2O95714 4834 aa13.8□□□□□ -0.2
PKP4-209ENST00000479398 CDK2AP2O75956 126 aa13.79□□□□□ -0.2
PKP4-209ENST00000479398 RPL23P62829 140 aaKnown RBP13.79□□□□□ -0.2
PKP4-209ENST00000479398 C15orf54Q8N8G6 183 aa13.79□□□□□ -0.2
PKP4-209ENST00000479398 ISOC2Q96AB3 205 aa13.79□□□□□ -0.2
PKP4-209ENST00000479398 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 FAM231BA6NCW3 169 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 PKIAP61925 76 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 FRZBQ92765 325 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 NAT8Q9UHE5 227 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 COX11Q9Y6N1 276 aa13.78□□□□□ -0.2
PKP4-209ENST00000479398 HIGD1CA8MV81 97 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 IQCJQ1A5X6 159 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 RMI2Q96E14 147 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 V9GYV3 84 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 LRP1BQ9NZR2 4599 aa13.77□□□□□ -0.21
PKP4-209ENST00000479398 IGHV1-24A0A0C4DH33 117 aa13.76□□□□□ -0.21
PKP4-209ENST00000479398 MPV17L2Q567V2 206 aa13.76□□□□□ -0.21
PKP4-209ENST00000479398 ATRAIDQ6UW56 229 aa13.76□□□□□ -0.21
PKP4-209ENST00000479398 TRAV26-2A0A0B4J265 109 aa13.75□□□□□ -0.21
PKP4-209ENST00000479398 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
PKP4-209ENST00000479398 Q0VG73 95 aa13.75□□□□□ -0.21
PKP4-209ENST00000479398 ADIRFQ15847 76 aa13.75□□□□□ -0.21
PKP4-209ENST00000479398 MAPKAPK5-AS1Q8N8E1 139 aa13.75□□□□□ -0.21
PKP4-209ENST00000479398 IGKV2D-24A0A075B6R9 120 aa13.74□□□□□ -0.21
PKP4-209ENST00000479398 GAGE6Q13070 117 aa13.74□□□□□ -0.21
PKP4-209ENST00000479398 ENHOQ6UWT2 76 aa13.74□□□□□ -0.21
PKP4-209ENST00000479398 Q8N814 137 aa13.74□□□□□ -0.21
PKP4-209ENST00000479398 Q8N976 141 aa13.74□□□□□ -0.21
PKP4-209ENST00000479398 ANGP03950 147 aaKnown RBP13.73□□□□□ -0.21
PKP4-209ENST00000479398 RAB14P61106 215 aa13.72□□□□□ -0.21
PKP4-209ENST00000479398 RBX1P62877 108 aa13.72□□□□□ -0.21
PKP4-209ENST00000479398 NUP35Q8NFH5 326 aa13.72□□□□□ -0.21
PKP4-209ENST00000479398 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
PKP4-209ENST00000479398 NTN5Q8WTR8 489 aaPredicted RBP13.72□□□□□ -0.21
PKP4-209ENST00000479398 GCSHP23434 173 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 WFDC2Q14508 124 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 BAALCQ8WXS3 180 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
PKP4-209ENST00000479398 TMEM243Q9BU79 118 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 DNAH5Q8TE73 4624 aa13.71□□□□□ -0.21
PKP4-209ENST00000479398 IGLV5-52A0A0A0MRZ9 124 aa13.7□□□□□ -0.22
PKP4-209ENST00000479398 KRTAP10-1P60331 282 aa13.7□□□□□ -0.22
PKP4-209ENST00000479398 RIGQ13278 110 aa13.7□□□□□ -0.22
PKP4-209ENST00000479398 COTL1Q14019 142 aa13.7□□□□□ -0.22
PKP4-209ENST00000479398 NAT8BQ9UHF3 227 aa13.7□□□□□ -0.22
PKP4-209ENST00000479398 LECT2O14960 151 aa13.69□□□□□ -0.22
PKP4-209ENST00000479398 CRPP02741 224 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms