RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 DAZ2Q13117 558 aaKnown RBP15.81■□□□□ 0.12
SDF4-206ENST00000478938 LPAL2Q16609 132 aa15.81■□□□□ 0.12
SDF4-206ENST00000478938 DAZ4Q86SG3 579 aaKnown RBP15.81■□□□□ 0.12
SDF4-206ENST00000478938 DAZ1Q9NQZ3 744 aaKnown RBP15.81■□□□□ 0.12
SDF4-206ENST00000478938 DAZ3Q9NR90 486 aaKnown RBP15.81■□□□□ 0.12
SDF4-206ENST00000478938 IGHV4OR15-8A0A075B7B6 117 aa15.81■□□□□ 0.12
SDF4-206ENST00000478938 A0A087WW49 117 aa15.81■□□□□ 0.12
SDF4-206ENST00000478938 MIAQ16674 131 aa15.81■□□□□ 0.12
SDF4-206ENST00000478938 C20orf173Q96LM9 149 aa15.81■□□□□ 0.12
SDF4-206ENST00000478938 BDP1A6H8Y1 2624 aa15.8■□□□□ 0.12
SDF4-206ENST00000478938 TRAV21A0A0B4J279 112 aa15.8■□□□□ 0.12
SDF4-206ENST00000478938 DAND5Q8N907 189 aa15.8■□□□□ 0.12
SDF4-206ENST00000478938 PEMTQ9UBM1 199 aa15.8■□□□□ 0.12
SDF4-206ENST00000478938 GPR179Q6PRD1 2367 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 A8MZ25 164 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 IGHV1-69P01742 117 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 CITED2Q99967 270 aaPredicted RBP15.79■□□□□ 0.12
SDF4-206ENST00000478938 RNASE4P34096 147 aaKnown RBP15.79■□□□□ 0.12
SDF4-206ENST00000478938 KLRB1Q12918 225 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 VMO1Q7Z5L0 202 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 KAAG1Q9UBP8 84 aa15.79■□□□□ 0.12
SDF4-206ENST00000478938 ADGRG4Q8IZF6 3080 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 CACNA1BQ00975 2339 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 C16orf92Q96LL3 132 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 M0R1W7 72 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 NPBQ8NG41 125 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 MRPL53Q96EL3 112 aaKnown RBP15.78■□□□□ 0.12
SDF4-206ENST00000478938 NDUFA12Q9UI09 145 aa15.78■□□□□ 0.12
SDF4-206ENST00000478938 NACAE9PAV3 2078 aa15.77■□□□□ 0.11
SDF4-206ENST00000478938 TIRAPP58753 221 aa15.77■□□□□ 0.11
SDF4-206ENST00000478938 TECTAO75443 2155 aa15.76■□□□□ 0.11
SDF4-206ENST00000478938 TRBV27A0A0K0K1C4 114 aa15.76■□□□□ 0.11
SDF4-206ENST00000478938 C15orf32Q32M92 178 aa15.76■□□□□ 0.11
SDF4-206ENST00000478938 RPL18AQ02543 176 aaKnown RBP15.76■□□□□ 0.11
SDF4-206ENST00000478938 UPK3BQ9BT76 320 aa15.76■□□□□ 0.11
SDF4-206ENST00000478938 NUP37Q8NFH4 326 aa15.75■□□□□ 0.11
SDF4-206ENST00000478938 MBD3L4A6NDZ8 208 aaPredicted RBP15.74■□□□□ 0.11
SDF4-206ENST00000478938 MBD3L3A6NE82 208 aaPredicted RBP15.74■□□□□ 0.11
SDF4-206ENST00000478938 MBD3L5A6NJ08 208 aaPredicted RBP15.74■□□□□ 0.11
SDF4-206ENST00000478938 MBD3L2Q8NHZ7 208 aaPredicted RBP15.74■□□□□ 0.11
SDF4-206ENST00000478938 PYGO1Q9Y3Y4 419 aa15.74■□□□□ 0.11
SDF4-206ENST00000478938 FAM74A4Q5TZK3 123 aa15.74■□□□□ 0.11
SDF4-206ENST00000478938 IGLV4-3A0A075B6K6 122 aa15.73■□□□□ 0.11
SDF4-206ENST00000478938 MRAPQ8TCY5 172 aa15.73■□□□□ 0.11
SDF4-206ENST00000478938 MED14OSP0DP75 135 aa15.73■□□□□ 0.11
SDF4-206ENST00000478938 C22orf24Q9Y442 160 aa15.73■□□□□ 0.11
SDF4-206ENST00000478938 CLEC19AQ6UXS0 136 aa15.72■□□□□ 0.11
SDF4-206ENST00000478938 C10orf105Q8TEF2 133 aa15.72■□□□□ 0.11
SDF4-206ENST00000478938 BAALC-AS2P0C853 105 aa15.71■□□□□ 0.11
SDF4-206ENST00000478938 SERP2Q8N6R1 65 aa15.71■□□□□ 0.11
SDF4-206ENST00000478938 FDCSPQ8NFU4 85 aa15.71■□□□□ 0.11
SDF4-206ENST00000478938 LINC00477Q96M19 166 aa15.71■□□□□ 0.11
SDF4-206ENST00000478938 CNOT1A5YKK6 2376 aaKnown RBP15.71■□□□□ 0.11
SDF4-206ENST00000478938 IGHV3OR16-10A0A075B7F0 116 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 A0A087WVE0 104 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 IGKV3D-7A0A0C4DH55 119 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 LYNX1G3V0Z9 82 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 NXPH4O95158 308 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 LYNX1P0DP58 116 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 RPL11P62913 178 aaKnown RBP15.71■□□□□ 0.1
SDF4-206ENST00000478938 LENEPQ9Y5L5 61 aa15.71■□□□□ 0.1
SDF4-206ENST00000478938 TTC28Q96AY4 2481 aa15.7■□□□□ 0.1
SDF4-206ENST00000478938 F6UB75 175 aa15.7■□□□□ 0.1
SDF4-206ENST00000478938 COX7A2LO14548 114 aa15.7■□□□□ 0.1
SDF4-206ENST00000478938 RNASE13Q5GAN3 156 aaKnown RBP15.7■□□□□ 0.1
SDF4-206ENST00000478938 ITLN2Q8WWU7 325 aaPredicted RBP15.7■□□□□ 0.1
SDF4-206ENST00000478938 DPM3Q9P2X0 92 aa15.7■□□□□ 0.1
SDF4-206ENST00000478938 C20orf203Q8NBC4 194 aa15.69■□□□□ 0.1
SDF4-206ENST00000478938 FAM215AQ9Y5M1 114 aa15.69■□□□□ 0.1
SDF4-206ENST00000478938 IGHV1-58A0A0C4DH39 117 aa15.68■□□□□ 0.1
SDF4-206ENST00000478938 CCDC140Q96MF4 163 aa15.68■□□□□ 0.1
SDF4-206ENST00000478938 BSPH1Q075Z2 132 aa15.68■□□□□ 0.1
SDF4-206ENST00000478938 UCNP55089 124 aa15.67■□□□□ 0.1
SDF4-206ENST00000478938 ECSCRQ19T08 205 aa15.67■□□□□ 0.1
SDF4-206ENST00000478938 DYNLRB1Q9NP97 96 aa15.67■□□□□ 0.1
SDF4-206ENST00000478938 BEAN1Q3B7T3 259 aa15.67■□□□□ 0.1
SDF4-206ENST00000478938 Q8N2B8 174 aa15.67■□□□□ 0.1
SDF4-206ENST00000478938 TRBV6-5A0A0K0K1A5 114 aa15.66■□□□□ 0.1
SDF4-206ENST00000478938 RNASE6Q93091 150 aaKnown RBP15.65■□□□□ 0.1
SDF4-206ENST00000478938 IGHV7-81A0A0B4J1V7 117 aa15.65■□□□□ 0.1
SDF4-206ENST00000478938 VSIG2Q96IQ7 327 aa15.65■□□□□ 0.1
SDF4-206ENST00000478938 PCNX1Q96RV3 2341 aa15.65■□□□□ 0.1
SDF4-206ENST00000478938 CD28P10747 220 aa15.64■□□□□ 0.09
SDF4-206ENST00000478938 C9orf139Q6ZV77 190 aa15.64■□□□□ 0.09
SDF4-206ENST00000478938 MAP1BP46821 2468 aaKnown RBP15.64■□□□□ 0.09
SDF4-206ENST00000478938 SYNJ2BPP57105 145 aa15.64■□□□□ 0.09
SDF4-206ENST00000478938 FAM218AQ96MZ4 157 aa15.64■□□□□ 0.09
SDF4-206ENST00000478938 M0QY20 66 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 MRPS36P82909 103 aaKnown RBP15.62■□□□□ 0.09
SDF4-206ENST00000478938 FAM104AQ969W3 186 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 INAFM2P0DMQ5 153 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 FHL2Q14192 279 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 ARRDC1-AS1Q9H2J1 176 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 Q9HAA7 133 aa15.62■□□□□ 0.09
SDF4-206ENST00000478938 A0A0U1RRA0 63 aa15.61■□□□□ 0.09
SDF4-206ENST00000478938 J3QLI3 93 aa15.61■□□□□ 0.09
SDF4-206ENST00000478938 SVEP1Q4LDE5 3571 aa15.61■□□□□ 0.09
SDF4-206ENST00000478938 USP17L23D6RBM5 183 aa15.61■□□□□ 0.09
SDF4-206ENST00000478938 LINC01561Q8N1V8 128 aa15.61■□□□□ 0.09
SDF4-206ENST00000478938 DMXL1Q9Y485 3027 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms