RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 GATCO43716 136 aaKnown RBP15.24■□□□□ 0.03
TRAF4-211ENST00000478021 TEX261Q6UWH6 196 aa15.24■□□□□ 0.03
TRAF4-211ENST00000478021 NIT1Q86X76 327 aa15.24■□□□□ 0.03
TRAF4-211ENST00000478021 TRGC1P0CF51 173 aa15.23■□□□□ 0.03
TRAF4-211ENST00000478021 SUMO4Q6EEV6 95 aa15.23■□□□□ 0.03
TRAF4-211ENST00000478021 URGCP-MRPS24S4R325 110 aa15.23■□□□□ 0.03
TRAF4-211ENST00000478021 ZNF727A8MUV8 499 aa15.22■□□□□ 0.03
TRAF4-211ENST00000478021 LAGE3Q14657 143 aa15.22■□□□□ 0.03
TRAF4-211ENST00000478021 TWIST1Q15672 202 aa15.22■□□□□ 0.03
TRAF4-211ENST00000478021 GTSF1Q8WW33 167 aa15.22■□□□□ 0.03
TRAF4-211ENST00000478021 M0QY20 66 aa15.21■□□□□ 0.03
TRAF4-211ENST00000478021 NDUFS6O75380 124 aaKnown RBP15.21■□□□□ 0.03
TRAF4-211ENST00000478021 FAM231DQ6ZW35 169 aa15.21■□□□□ 0.03
TRAF4-211ENST00000478021 DPH3P1Q9H4G8 78 aa15.21■□□□□ 0.03
TRAF4-211ENST00000478021 RYR1P21817 5038 aa15.2■□□□□ 0.02
TRAF4-211ENST00000478021 TRBV6-8A0A0A6YYG3 113 aa15.2■□□□□ 0.02
TRAF4-211ENST00000478021 WDR73Q6P4I2 378 aa15.2■□□□□ 0.02
TRAF4-211ENST00000478021 LINC01551Q86U37 167 aa15.2■□□□□ 0.02
TRAF4-211ENST00000478021 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-211ENST00000478021 CNFNQ9BYD5 112 aa15.19■□□□□ 0.02
TRAF4-211ENST00000478021 A0A087WX48 190 aa15.18■□□□□ 0.02
TRAF4-211ENST00000478021 H7C1H1 209 aa15.18■□□□□ 0.02
TRAF4-211ENST00000478021 PGLYRP4Q96LB8 373 aa15.18■□□□□ 0.02
TRAF4-211ENST00000478021 DNAJC30Q96LL9 226 aa15.18■□□□□ 0.02
TRAF4-211ENST00000478021 KLK12Q9UKR0 248 aa15.18■□□□□ 0.02
TRAF4-211ENST00000478021 LRCOL1A6NCL2 159 aa15.17■□□□□ 0.02
TRAF4-211ENST00000478021 A8MWL6 223 aa15.17■□□□□ 0.02
TRAF4-211ENST00000478021 TMEM262E9PQX1 116 aa15.17■□□□□ 0.02
TRAF4-211ENST00000478021 SRSF3P84103 164 aaKnown RBP15.17■□□□□ 0.02
TRAF4-211ENST00000478021 NTM-AS1Q6ZSK4 140 aa15.17■□□□□ 0.02
TRAF4-211ENST00000478021 PGPEP1Q9NXJ5 209 aa15.17■□□□□ 0.02
TRAF4-211ENST00000478021 TRAV8-3A0A0A6YYJ7 113 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 C9JQL5 133 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 KCNIP4Q6PIL6 250 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 RASL11AQ6T310 242 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 CHCHD5Q9BSY4 110 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 LRP1BQ9NZR2 4599 aa15.16■□□□□ 0.02
TRAF4-211ENST00000478021 DNAH5Q8TE73 4624 aa15.15■□□□□ 0.02
TRAF4-211ENST00000478021 CT83Q5H943 113 aa15.15■□□□□ 0.02
TRAF4-211ENST00000478021 CHCHD7Q9BUK0 85 aa15.15■□□□□ 0.02
TRAF4-211ENST00000478021 TM2D2Q9BX73 214 aa15.15■□□□□ 0.02
TRAF4-211ENST00000478021 FOXA3P55318 350 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-211ENST00000478021 MPV17L2Q567V2 206 aa15.14■□□□□ 0.01
TRAF4-211ENST00000478021 TRAV26-2A0A0B4J265 109 aa15.13■□□□□ 0.01
TRAF4-211ENST00000478021 TMEM97Q5BJF2 176 aa15.13■□□□□ 0.01
TRAF4-211ENST00000478021 CDPF1Q6NVV7 123 aa15.13■□□□□ 0.01
TRAF4-211ENST00000478021 UBE2WQ96B02 151 aa15.13■□□□□ 0.01
TRAF4-211ENST00000478021 OSTCQ9NRP0 149 aa15.13■□□□□ 0.01
TRAF4-211ENST00000478021 CDK2AP2O75956 126 aa15.12■□□□□ 0.01
TRAF4-211ENST00000478021 PEA15Q15121 130 aa15.12■□□□□ 0.01
TRAF4-211ENST00000478021 TMEM241Q24JQ0 296 aa15.12■□□□□ 0.01
TRAF4-211ENST00000478021 DEFB104AQ8WTQ1 72 aa15.12■□□□□ 0.01
TRAF4-211ENST00000478021 NIT2Q9NQR4 276 aa15.12■□□□□ 0.01
TRAF4-211ENST00000478021 RPL23P62829 140 aaKnown RBP15.11■□□□□ 0.01
TRAF4-211ENST00000478021 GAGE6Q13070 117 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 WFDC2Q14508 124 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 ELOBQ15370 118 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 FAM74A3Q4VXF1 159 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 SMIM15Q7Z3B0 74 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 C15orf54Q8N8G6 183 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 GATD1Q8NB37 220 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 TSKUQ8WUA8 353 aa15.11■□□□□ 0.01
TRAF4-211ENST00000478021 TRBV25-1A0A075B6N4 114 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 IGKV2D-24A0A075B6R9 120 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 LECT2O14960 151 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 ADIRFQ15847 76 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 Q8N814 137 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 MAPKAPK5-AS1Q8N8E1 139 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 ISOC2Q96AB3 205 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 BORCS7Q96B45 105 aa15.1■□□□□ 0.01
TRAF4-211ENST00000478021 IGHV1-24A0A0C4DH33 117 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 ATRAIDQ6UW56 229 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 Q8N976 141 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 RMI2Q96E14 147 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 V9GYV3 84 aa15.09■□□□□ 0.01
TRAF4-211ENST00000478021 ANGP03950 147 aaKnown RBP15.08■□□□□ 0
TRAF4-211ENST00000478021 IQCJQ1A5X6 159 aa15.08■□□□□ 0
TRAF4-211ENST00000478021 GFRA4Q9GZZ7 299 aa15.08■□□□□ 0
TRAF4-211ENST00000478021 NAT8Q9UHE5 227 aa15.08■□□□□ 0
TRAF4-211ENST00000478021 ABCA13Q86UQ4 5058 aa15.07■□□□□ 0
TRAF4-211ENST00000478021 BAALCQ8WXS3 180 aa15.07■□□□□ 0
TRAF4-211ENST00000478021 RPL39LQ96EH5 51 aaKnown RBP15.07■□□□□ 0
TRAF4-211ENST00000478021 IGLV5-52A0A0A0MRZ9 124 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 A0A1B0GUT8 65 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 CRPP02741 224 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 KRTAP10-1P60331 282 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 PKIAP61925 76 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 ENHOQ6UWT2 76 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 COX11Q9Y6N1 276 aa15.06■□□□□ 0
TRAF4-211ENST00000478021 RBX1P62877 108 aa15.05■□□□□ -0
TRAF4-211ENST00000478021 FAM231BA6NCW3 169 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 GCSHP23434 173 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 Q0VG73 95 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 CLPSL2Q6UWE3 100 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 TMEM243Q9BU79 118 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 SMDT1Q9H4I9 107 aa15.04■□□□□ -0
TRAF4-211ENST00000478021 HSPG2P98160 4391 aa15.03■□□□□ -0
TRAF4-211ENST00000478021 COTL1Q14019 142 aa15.03■□□□□ -0
TRAF4-211ENST00000478021 NTN5Q8WTR8 489 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms