RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, human

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP11-208	ENST00000477567		P0DMU3	169 aa		10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	FAM231A	P0DMU4	169 aa		10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	FAM231C	P0DMU5	169 aa		10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	MRPL51	Q4U2R6	128 aa	Known RBP	10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	NEXN-AS1	Q8NBZ9	246 aa		10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	DNAJC30	Q96LL9	226 aa		10.84	□□□□□ -0.67
MMP11-208	ENST00000477567	TRBV7-3	A0A075B6L6	115 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	TRAV26-2	A0A0B4J265	109 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	HLA-DQA1	P01909	254 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	MT-ND6	P03923	174 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	SH2D6	Q7Z4S9	175 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	NIT2	Q9NQR4	276 aa		10.83	□□□□□ -0.68
MMP11-208	ENST00000477567	PPBP	P02775	128 aa		10.82	□□□□□ -0.68
MMP11-208	ENST00000477567	RPL36A	P83881	106 aa	Known RBP	10.82	□□□□□ -0.68
MMP11-208	ENST00000477567	RPL36AL	Q969Q0	106 aa	Known RBP	10.82	□□□□□ -0.68
MMP11-208	ENST00000477567	TRBV6-5	A0A0K0K1A5	114 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	SCO1	O75880	301 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	GAS8-AS1	O95177	125 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	NUDT3	O95989	172 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	PPP1R17	O96001	155 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	SRI	P30626	198 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	UBE2D3	P61077	147 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	UBE2D2	P62837	147 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	NEGR1	Q7Z3B1	354 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	ZNRF2	Q8NHG8	242 aa		10.81	□□□□□ -0.68
MMP11-208	ENST00000477567	BIRC6	Q9NR09	4857 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	GAGE12J	A6NER3	117 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	COLCA2	A8K830	154 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	CKS2	P33552	79 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	GAGE1	Q13065	139 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	GAGE4	Q13068	117 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	GAGE5	Q13069	117 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	GAGE13	Q4V321	117 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	NRAC	Q8N912	160 aa		10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	RPL39L	Q96EH5	51 aa	Known RBP	10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	EPPK1	P58107	5090 aa	Known RBP	10.8	□□□□□ -0.68
MMP11-208	ENST00000477567	PLEC	Q15149	4684 aa	Known RBP	10.79	□□□□□ -0.68
MMP11-208	ENST00000477567		D6R8Y8	96 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	PHOX2A	O14813	284 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	RPS10	P46783	165 aa	Known RBP	10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	TIRAP	P58753	221 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	ORMDL3	Q8N138	153 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	ATP6V0E2	Q8NHE4	81 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	TNFRSF18	Q9Y5U5	241 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	RYR2	Q92736	4967 aa		10.79	□□□□□ -0.68
MMP11-208	ENST00000477567	SMKR1	H3BMG3	65 aa		10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	NCR2	O95944	276 aa		10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	APCS	P02743	223 aa		10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	OR10J3	Q5JRS4	329 aa		10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	DAZ4	Q86SG3	579 aa	Known RBP	10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	MRPL18	Q9H0U6	180 aa	Known RBP	10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	DAZ3	Q9NR90	486 aa	Known RBP	10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	LAMTOR2	Q9Y2Q5	125 aa		10.78	□□□□□ -0.68
MMP11-208	ENST00000477567	POLR2K	P53803	58 aa	Known RBP	10.77	□□□□□ -0.69
MMP11-208	ENST00000477567	LYPD5	Q6UWN5	251 aa		10.77	□□□□□ -0.69
MMP11-208	ENST00000477567	C20orf78	Q9BR46	151 aa		10.77	□□□□□ -0.69
MMP11-208	ENST00000477567	PRSS47	A8MTI9	375 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	TNFRSF6B	O95407	300 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	RPL32	P62910	135 aa	Known RBP	10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	ESRG	Q1W209	222 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	PRELID3A	Q96N28	172 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	GTSF1L	Q9H1H1	148 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	ST20	Q9HBF5	79 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	TRAPPC1	Q9Y5R8	145 aa		10.76	□□□□□ -0.69
MMP11-208	ENST00000477567	TRBV27	A0A0K0K1C4	114 aa		10.75	□□□□□ -0.69
MMP11-208	ENST00000477567	SDHAF1	A6NFY7	115 aa		10.75	□□□□□ -0.69
MMP11-208	ENST00000477567	NPY	P01303	97 aa		10.75	□□□□□ -0.69
MMP11-208	ENST00000477567	SUMO2	P61956	95 aa	Known RBP	10.75	□□□□□ -0.69
MMP11-208	ENST00000477567	TMEM70	Q9BUB7	260 aa		10.75	□□□□□ -0.69
MMP11-208	ENST00000477567	RAB5A	P20339	215 aa		10.74	□□□□□ -0.69
MMP11-208	ENST00000477567	CCL18	P55774	89 aa		10.74	□□□□□ -0.69
MMP11-208	ENST00000477567	FABP9	Q0Z7S8	132 aa		10.74	□□□□□ -0.69
MMP11-208	ENST00000477567	KIAA1644	Q3SXP7	199 aa		10.74	□□□□□ -0.69
MMP11-208	ENST00000477567	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.74	□□□□□ -0.69
MMP11-208	ENST00000477567	TMEM97	Q5BJF2	176 aa		10.73	□□□□□ -0.69
MMP11-208	ENST00000477567	LGALS9C	Q6DKI2	356 aa		10.73	□□□□□ -0.69
MMP11-208	ENST00000477567	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.73	□□□□□ -0.69
MMP11-208	ENST00000477567	LINC00588	Q9Y4M8	146 aa		10.73	□□□□□ -0.69
MMP11-208	ENST00000477567	IGHV3-38	A0A0C4DH36	116 aa		10.72	□□□□□ -0.69
MMP11-208	ENST00000477567	VCY	O14598	125 aa		10.72	□□□□□ -0.69
MMP11-208	ENST00000477567	LELP1	Q5T871	98 aa		10.72	□□□□□ -0.69
MMP11-208	ENST00000477567	UPK3B	Q9BT76	320 aa		10.72	□□□□□ -0.69
MMP11-208	ENST00000477567	MRPS16	Q9Y3D3	137 aa	Known RBP	10.72	□□□□□ -0.69
MMP11-208	ENST00000477567	TRBV6-8	A0A0A6YYG3	113 aa		10.71	□□□□□ -0.69
MMP11-208	ENST00000477567		I3L3M4	83 aa		10.71	□□□□□ -0.69
MMP11-208	ENST00000477567	NTM-AS1	Q6ZSK4	140 aa		10.71	□□□□□ -0.69
MMP11-208	ENST00000477567	SMIM2	Q9BVW6	85 aa		10.71	□□□□□ -0.69
MMP11-208	ENST00000477567	IGLV2-18	A0A075B6J9	118 aa		10.7	□□□□□ -0.7
MMP11-208	ENST00000477567	TSHB	P01222	138 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	TRGC2	P03986	189 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	PMCH	P20382	165 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	COTL1	Q14019	142 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	IQCJ	Q1A5X6	159 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	LINC00476	Q8WZB0	136 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	LYST	Q99698	3801 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	MAP1LC3A	Q9H492	121 aa		10.69	□□□□□ -0.7
MMP11-208	ENST00000477567	KIR2DL4	Q99706	377 aa		10.68	□□□□□ -0.7
MMP11-208	ENST00000477567	VPS13D	Q5THJ4	4388 aa		10.68	□□□□□ -0.7
MMP11-208	ENST00000477567	TRBV25-1	A0A075B6N4	114 aa		10.67	□□□□□ -0.7
MMP11-208	ENST00000477567	IGHV1-24	A0A0C4DH33	117 aa		10.67	□□□□□ -0.7

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