RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KLF12Q9Y4X4 402 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
UBR3-209ENST00000477461 TRAV12-2A0A075B6T6 113 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TRAV12-3A0A0B4J271 114 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TRAV21A0A0B4J279 112 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TMEM218A2RU14 115 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 XKRY2A2RUG3 117 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TMEM189A5PLL7 270 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 RBMY1BA6NDE4 496 aaKnown RBP2.47□□□□□ -2.01
UBR3-209ENST00000477461 RBMY1EA6NEQ0 496 aaKnown RBP2.47□□□□□ -2.01
UBR3-209ENST00000477461 A8MTW9 85 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 FABP5P3A8MUU1 101 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 KRBOX1C9JBD0 128 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 C9JQL5 133 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 H7BYZ3 331 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 K7EIL1 84 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 GATCO43716 136 aaKnown RBP2.47□□□□□ -2.01
UBR3-209ENST00000477461 P01737 135 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 APOC3P02656 99 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 ORM1P02763 201 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 PFN1P07737 140 aaKnown RBP2.47□□□□□ -2.01
UBR3-209ENST00000477461 RBMY1DP0C7P1 496 aaKnown RBP2.47□□□□□ -2.01
UBR3-209ENST00000477461 HTN1P15515 57 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 CRISP2P16562 243 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 DEFA6Q01524 100 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 BTN1A1Q13410 526 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 OR5I1Q13606 314 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 DEFB135Q30KP9 77 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 FAM162BQ5T6X4 162 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 AMTNQ6UX39 209 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 SLC7A5P1Q8MH63 180 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TMEM256Q8N2U0 113 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 ZFAND2AQ8N6M9 145 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 NKAPP1Q8N9T2 125 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 ZC2HC1AQ96GY0 325 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 KCNS1Q96KK3 526 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 SEC11CQ9BY50 192 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 KLK12Q9UKR0 248 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 LY96Q9Y6Y9 160 aa2.47□□□□□ -2.01
UBR3-209ENST00000477461 TENM1Q9UKZ4 2725 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 TRBV20OR9-2A0A075B6H5 130 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 TMSB15BA0A087X1C1 80 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 ZNF705GA8MUZ8 300 aaPredicted RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 B4DEV8 164 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 PPP1R2P9O14990 202 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 SH2D1AO60880 128 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 IGLV2-8P01709 118 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 MT-ND4LP03901 98 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 CTRLP40313 264 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 ASIPP42127 132 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 RPS20P60866 119 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 RPL23P62829 140 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 RRN3P1Q2M238 152 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 MAJINQ3KP22 176 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 IBA57Q5T440 356 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 PRR9Q5T870 116 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 Q6AWC8 147 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 LINC01551Q86U37 167 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 SVBPQ8N300 66 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 OR2D3Q8NGH3 330 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 ISOC2Q96AB3 205 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 BORCS7Q96B45 105 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 FAM19A4Q96LR4 140 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 OSTCQ9NRP0 149 aa2.46□□□□□ -2.02
UBR3-209ENST00000477461 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 TIMM8BQ9Y5J9 83 aaPredicted RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 FBN1P35555 2871 aaKnown RBP2.46□□□□□ -2.02
UBR3-209ENST00000477461 SVEP1Q4LDE5 3571 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 ANK3Q12955 4377 aaKnown RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 GRIFINA4D1Z8 144 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 SMIM9A6NGZ8 99 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 A8MWL6 223 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 K7EN84 100 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 RS1O15537 224 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 CRXO43186 299 aaPredicted RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 MIFP14174 115 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 ADCYAP1P18509 176 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 S100A1P23297 94 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 CRIP1P50238 77 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 ZNF80P51504 273 aaPredicted RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 RPL19P84098 196 aaKnown RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 LINC00322Q6ZN03 302 aaPredicted RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 ZNF493Q6ZR52 646 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 FAM231DQ6ZW35 169 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 C1orf158Q8N1D5 194 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 MTURNQ8N3F0 131 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 OR11H2Q8NH07 326 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 TMEM263Q8WUH6 116 aaKnown RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 CHCHD10Q8WYQ3 142 aaPredicted RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 SFRP2Q96HF1 295 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 PGLYRP4Q96LB8 373 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 HIST1H4GQ99525 98 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 LINC00467Q9BRT7 94 aa2.45□□□□□ -2.02
UBR3-209ENST00000477461 RNASE7Q9H1E1 156 aaKnown RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
UBR3-209ENST00000477461 TP53TG1Q9Y2A0 90 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms