RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 ATP6V0CP27449 155 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 CRIP1P50238 77 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 UBE2G1P62253 170 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 RBX1P62877 108 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 FMC1Q96HJ9 113 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 TNXBP22105 4242 aa8.01□□□□□ -1.13
SKA3-206ENST00000475251 A0A087WYN8 130 aa8□□□□□ -1.13
SKA3-206ENST00000475251 TMSB15BA0A087X1C1 80 aa8□□□□□ -1.13
SKA3-206ENST00000475251 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
SKA3-206ENST00000475251 P01737 135 aa8□□□□□ -1.13
SKA3-206ENST00000475251 GZMBP10144 247 aa8□□□□□ -1.13
SKA3-206ENST00000475251 ZNF674Q2M3X9 581 aa8□□□□□ -1.13
SKA3-206ENST00000475251 PRR27Q6MZM9 219 aa8□□□□□ -1.13
SKA3-206ENST00000475251 LINC01600Q96MT4 127 aa8□□□□□ -1.13
SKA3-206ENST00000475251 MARVELD1Q9BSK0 173 aa8□□□□□ -1.13
SKA3-206ENST00000475251 UPK1BO75841 260 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 UBE2G2P60604 165 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 REG3AQ06141 175 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 KRTAP26-1Q6PEX3 210 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 DERL1Q9BUN8 251 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 ZNF471Q9BX82 626 aaPredicted RBP7.99□□□□□ -1.13
SKA3-206ENST00000475251 VAX2Q9UIW0 290 aa7.99□□□□□ -1.13
SKA3-206ENST00000475251 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 F5H697 171 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 PHOX2AO14813 284 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 GAGE6Q13070 117 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
SKA3-206ENST00000475251 IGLV10-54A0A075B6I4 117 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 FAM74A7A6NL05 159 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 WDR73Q6P4I2 378 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 NTM-AS1Q6ZSK4 140 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 AQP10Q96PS8 301 aa7.97□□□□□ -1.13
SKA3-206ENST00000475251 IGHV1-24A0A0C4DH33 117 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 LTAP01374 205 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 CXCL1P09341 107 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 REG3GQ6UW15 175 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 KIF25-AS1Q9Y6Z4 181 aa7.96□□□□□ -1.14
SKA3-206ENST00000475251 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
SKA3-206ENST00000475251 DEFA1P59665 94 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 DEFA3P59666 94 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 OR10AG1Q8NH19 301 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 GTSF1Q8WW33 167 aa7.95□□□□□ -1.14
SKA3-206ENST00000475251 BORCS7-ASMTA0A0B4J1R7 106 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 A0A1B0GUV1 79 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 H7C1H1 209 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 SNAI2O43623 268 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 OR5AL1P0C617 328 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 AKR1C3P42330 323 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
SKA3-206ENST00000475251 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
SKA3-206ENST00000475251 NDUFS6O75380 124 aaKnown RBP7.93□□□□□ -1.14
SKA3-206ENST00000475251 FHITP49789 147 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 ZNF726P1Q15940 193 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 AKR1C8PQ5T2L2 129 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 C20orf203Q8NBC4 194 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 STOML3Q8TAV4 291 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
SKA3-206ENST00000475251 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
SKA3-206ENST00000475251 SLPIP03973 132 aa7.92□□□□□ -1.14
SKA3-206ENST00000475251 S100A9P06702 114 aaKnown RBP7.92□□□□□ -1.14
SKA3-206ENST00000475251 RPS10P46783 165 aaKnown RBP7.92□□□□□ -1.14
SKA3-206ENST00000475251 COX6A2Q02221 97 aa7.92□□□□□ -1.14
SKA3-206ENST00000475251 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
SKA3-206ENST00000475251 INO80EQ8NBZ0 244 aaPredicted RBP7.92□□□□□ -1.14
SKA3-206ENST00000475251 TMEM243Q9BU79 118 aa7.92□□□□□ -1.14
SKA3-206ENST00000475251 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 MAP1LC3B2A6NCE7 125 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 UBE2L6O14933 153 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 SULT1A2P50226 295 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 IFITM3Q01628 133 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 MAP1LC3BQ9GZQ8 125 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 LINC00474Q9P2X8 69 aa7.91□□□□□ -1.14
SKA3-206ENST00000475251 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
SKA3-206ENST00000475251 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
SKA3-206ENST00000475251 RAB5CP51148 216 aa7.9□□□□□ -1.14
SKA3-206ENST00000475251 RPL7L1Q6DKI1 246 aaKnown RBP7.9□□□□□ -1.14
SKA3-206ENST00000475251 STPG4Q8N801 248 aa7.9□□□□□ -1.14
SKA3-206ENST00000475251 IGLV4-60A0A075B6I1 120 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 M0QY20 66 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 PGLYRP4Q96LB8 373 aa7.89□□□□□ -1.15
SKA3-206ENST00000475251 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 MGPP08493 103 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms