RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FUSP35637 526 aaKnown RBP eCLIP16.1■□□□□ 0.174e-7■□□□□ 8.1
CPNE1-223ENST00000475146 GATCO43716 136 aaKnown RBP16.09■□□□□ 0.17
CPNE1-223ENST00000475146 NTF3P20783 257 aa16.09■□□□□ 0.17
CPNE1-223ENST00000475146 KCNIP4Q6PIL6 250 aa16.09■□□□□ 0.17
CPNE1-223ENST00000475146 PGPEP1Q9NXJ5 209 aa16.09■□□□□ 0.17
CPNE1-223ENST00000475146 A0A087WX48 190 aa16.08■□□□□ 0.16
CPNE1-223ENST00000475146 H7C1H1 209 aa16.08■□□□□ 0.16
CPNE1-223ENST00000475146 NDUFS6O75380 124 aaKnown RBP16.08■□□□□ 0.16
CPNE1-223ENST00000475146 SUMO4Q6EEV6 95 aa16.08■□□□□ 0.16
CPNE1-223ENST00000475146 TRBV6-8A0A0A6YYG3 113 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 TRAV8-3A0A0A6YYJ7 113 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 ZNF727A8MUV8 499 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 SRP19P09132 144 aaKnown RBP16.07■□□□□ 0.16
CPNE1-223ENST00000475146 TWIST1Q15672 202 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 WDR73Q6P4I2 378 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 DPH3P1Q9H4G8 78 aa16.07■□□□□ 0.16
CPNE1-223ENST00000475146 M0QY20 66 aa16.06■□□□□ 0.16
CPNE1-223ENST00000475146 CDPF1Q6NVV7 123 aa16.06■□□□□ 0.16
CPNE1-223ENST00000475146 FAM231DQ6ZW35 169 aa16.06■□□□□ 0.16
CPNE1-223ENST00000475146 TM2D2Q9BX73 214 aa16.06■□□□□ 0.16
CPNE1-223ENST00000475146 TMEM262E9PQX1 116 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 TEX261Q6UWH6 196 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 GTSF1Q8WW33 167 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 CHCHD7Q9BUK0 85 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 CNFNQ9BYD5 112 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 KLK12Q9UKR0 248 aa16.05■□□□□ 0.16
CPNE1-223ENST00000475146 CDK2AP2O75956 126 aa16.04■□□□□ 0.16
CPNE1-223ENST00000475146 TMEM97Q5BJF2 176 aa16.04■□□□□ 0.16
CPNE1-223ENST00000475146 LINC01551Q86U37 167 aa16.04■□□□□ 0.16
CPNE1-223ENST00000475146 DNAJC30Q96LL9 226 aa16.04■□□□□ 0.16
CPNE1-223ENST00000475146 LRCOL1A6NCL2 159 aa16.03■□□□□ 0.16
CPNE1-223ENST00000475146 A8MWL6 223 aa16.03■□□□□ 0.16
CPNE1-223ENST00000475146 RASL11AQ6T310 242 aa16.03■□□□□ 0.16
CPNE1-223ENST00000475146 CHCHD5Q9BSY4 110 aa16.03■□□□□ 0.16
CPNE1-223ENST00000475146 ELOBQ15370 118 aa16.02■□□□□ 0.16
CPNE1-223ENST00000475146 CT83Q5H943 113 aa16.01■□□□□ 0.15
CPNE1-223ENST00000475146 UBE2WQ96B02 151 aa16.01■□□□□ 0.15
CPNE1-223ENST00000475146 PGLYRP4Q96LB8 373 aa16.01■□□□□ 0.15
CPNE1-223ENST00000475146 NTM-AS1Q6ZSK4 140 aa16■□□□□ 0.15
CPNE1-223ENST00000475146 SMIM15Q7Z3B0 74 aa16■□□□□ 0.15
CPNE1-223ENST00000475146 RMI2Q96E14 147 aa16■□□□□ 0.15
CPNE1-223ENST00000475146 PKIAP61925 76 aa15.99■□□□□ 0.15
CPNE1-223ENST00000475146 LRP1BQ9NZR2 4599 aa15.99■□□□□ 0.15
CPNE1-223ENST00000475146 TRBV25-1A0A075B6N4 114 aa15.98■□□□□ 0.15
CPNE1-223ENST00000475146 MPV17L2Q567V2 206 aa15.98■□□□□ 0.15
CPNE1-223ENST00000475146 BORCS7Q96B45 105 aa15.98■□□□□ 0.15
CPNE1-223ENST00000475146 NIT2Q9NQR4 276 aa15.98■□□□□ 0.15
CPNE1-223ENST00000475146 COX11Q9Y6N1 276 aa15.98■□□□□ 0.15
CPNE1-223ENST00000475146 IGKV2D-24A0A075B6R9 120 aa15.97■□□□□ 0.15
CPNE1-223ENST00000475146 PEA15Q15121 130 aa15.97■□□□□ 0.15
CPNE1-223ENST00000475146 Q8N814 137 aa15.97■□□□□ 0.15
CPNE1-223ENST00000475146 C15orf54Q8N8G6 183 aa15.97■□□□□ 0.15
CPNE1-223ENST00000475146 OSTCQ9NRP0 149 aa15.97■□□□□ 0.15
CPNE1-223ENST00000475146 RYR1P21817 5038 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 IGLV5-52A0A0A0MRZ9 124 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 IGHV1-24A0A0C4DH33 117 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 TMEM241Q24JQ0 296 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 FAM74A3Q4VXF1 159 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 TSKUQ8WUA8 353 aa15.96■□□□□ 0.15
CPNE1-223ENST00000475146 TRAV26-2A0A0B4J265 109 aa15.95■□□□□ 0.14
CPNE1-223ENST00000475146 C9JQL5 133 aa15.95■□□□□ 0.14
CPNE1-223ENST00000475146 CRPP02741 224 aa15.95■□□□□ 0.14
CPNE1-223ENST00000475146 ANGP03950 147 aaKnown RBP15.95■□□□□ 0.14
CPNE1-223ENST00000475146 GAGE6Q13070 117 aa15.95■□□□□ 0.14
CPNE1-223ENST00000475146 NTN5Q8WTR8 489 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-223ENST00000475146 HIGD1CA8MV81 97 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 LECT2O14960 151 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 FOXA3P55318 350 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-223ENST00000475146 SRSF3P84103 164 aaKnown RBP15.94■□□□□ 0.14
CPNE1-223ENST00000475146 Q0VG73 95 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 WFDC2Q14508 124 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 IQCJQ1A5X6 159 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 ATRAIDQ6UW56 229 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 Q8N976 141 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 GATD1Q8NB37 220 aa15.94■□□□□ 0.14
CPNE1-223ENST00000475146 GCSHP23434 173 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 KRTAP10-1P60331 282 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 ADIRFQ15847 76 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 MAPKAPK5-AS1Q8N8E1 139 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 ISOC2Q96AB3 205 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 GFRA4Q9GZZ7 299 aa15.93■□□□□ 0.14
CPNE1-223ENST00000475146 RPL23P62829 140 aaKnown RBP15.92■□□□□ 0.14
CPNE1-223ENST00000475146 DEFB104AQ8WTQ1 72 aa15.92■□□□□ 0.14
CPNE1-223ENST00000475146 BAALCQ8WXS3 180 aa15.92■□□□□ 0.14
CPNE1-223ENST00000475146 NAT8Q9UHE5 227 aa15.92■□□□□ 0.14
CPNE1-223ENST00000475146 A0A1B0GUT8 65 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 RBX1P62877 108 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 FRZBQ92765 325 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 TMEM243Q9BU79 118 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 C1orf43Q9BWL3 253 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 V9GYV3 84 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 DNAH5Q8TE73 4624 aa15.91■□□□□ 0.14
CPNE1-223ENST00000475146 FAM231BA6NCW3 169 aa15.9■□□□□ 0.14
CPNE1-223ENST00000475146 COTL1Q14019 142 aa15.9■□□□□ 0.14
CPNE1-223ENST00000475146 ENHOQ6UWT2 76 aa15.9■□□□□ 0.14
CPNE1-223ENST00000475146 RPL39LQ96EH5 51 aaKnown RBP15.9■□□□□ 0.14
CPNE1-223ENST00000475146 SMDT1Q9H4I9 107 aa15.9■□□□□ 0.14
CPNE1-223ENST00000475146 CLPSL2Q6UWE3 100 aa15.89■□□□□ 0.13
CPNE1-223ENST00000475146 AMTP48728 403 aa15.88■□□□□ 0.13
CPNE1-223ENST00000475146 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms