RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IGHV3-35A0A0C4DH35 117 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 TCL1BO95988 128 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 CRYGDP07320 174 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 SLC25A29Q8N8R3 303 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 EEF1AKMT3Q96AZ1 226 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 TMEM141Q96I45 108 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
HDAC3-205ENST00000469550 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV4OR15-8A0A075B7B6 117 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 A0A087WW49 117 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 ASIPP42127 132 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 PRR9Q5T870 116 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 ZFAND2AQ8N6M9 145 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 RPL39LQ96EH5 51 aaKnown RBP7.19□□□□□ -1.26
HDAC3-205ENST00000469550 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 TRBV7-9A0A0J9YWB2 115 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 OVOL1O14753 267 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 CFC1P0CG37 223 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV4-38-2P0DP08 117 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 PMVKQ15126 192 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 CLEC19AQ6UXS0 136 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 Q6ZQT7 251 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 GPHB5Q86YW7 130 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 GLMPQ8WWB7 406 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 PHLDA3Q9Y5J5 127 aa7.19□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3-66A0A0C4DH42 116 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 NXPH4O95158 308 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 S100A4P26447 101 aaKnown RBP7.18□□□□□ -1.26
HDAC3-205ENST00000469550 TMEM86BQ8N661 226 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 C14orf178Q8N769 122 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-205ENST00000469550 KLHL30-AS1Q8NEE0 82 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 PTH2Q96A98 100 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 C16orf92Q96LL3 132 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 DUX5Q96PT3 197 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 TIMM17AQ99595 171 aa7.18□□□□□ -1.26
HDAC3-205ENST00000469550 TSHBP01222 138 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 ZFAND6Q6FIF0 208 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 PKD1L1Q8TDX9 2849 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 DUSP14O95147 198 aaKnown RBP7.17□□□□□ -1.26
HDAC3-205ENST00000469550 NDUFA7O95182 113 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 ECSCRQ19T08 205 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 OR10J6PQ8NGY7 276 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 RNF183Q96D59 192 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 CITED1Q99966 193 aa7.17□□□□□ -1.26
HDAC3-205ENST00000469550 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 P0DMU3 169 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 POLR2KP53803 58 aaKnown RBP7.16□□□□□ -1.26
HDAC3-205ENST00000469550 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 AMELXQ99217 191 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3OR16-13A0A075B7E8 117 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3-74A0A0B4J1X5 117 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 VCYO14598 125 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 MGPP08493 103 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 LINC00315P59091 139 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 GAGE5Q13069 117 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 GAGE6Q13070 117 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 Q6YL49 198 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
HDAC3-205ENST00000469550 IGHV3OR16-10A0A075B7F0 116 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 A0A0B4J2C4 111 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 LINC01548A6NM66 108 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 SOCS3O14543 225 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 SLC25A20O43772 301 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 IGF1P05019 195 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 RNASE3P12724 160 aaKnown RBP7.15□□□□□ -1.27
HDAC3-205ENST00000469550 DEFB112Q30KQ8 113 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 SFTA2Q6UW10 78 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 Q6ZS46 218 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 SIRPDQ9H106 197 aa7.15□□□□□ -1.27
HDAC3-205ENST00000469550 IGHV3-49A0A0A0MS15 119 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 J3QQQ9 107 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 RHODO00212 210 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 KIR2DL4Q99706 377 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 CMYA5Q8N3K9 4069 aa7.14□□□□□ -1.27
HDAC3-205ENST00000469550 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 IGHV3-33P01772 117 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 UBE2E1P51965 193 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 TSPEAR-AS2P59090 65 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 Q6Q795 121 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 BRD3OSQ6XYD6 125 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
HDAC3-205ENST00000469550 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
HDAC3-205ENST00000469550 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms