RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 PRSS29PA6NIE9 313 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 M0QY20 66 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 SMIM17P0DL12 118 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 ZNF56Q15929 161 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 RPL36ALQ969Q0 106 aaKnown RBP6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 NAT8Q9UHE5 227 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 V9GYV3 84 aa6.42□□□□□ -1.38
SDCCAG3-208ENST00000466579 TRAV9-2A0A087WT02 112 aa6.41□□□□□ -1.38
SDCCAG3-208ENST00000466579 EVI2AP22794 236 aa6.41□□□□□ -1.38
SDCCAG3-208ENST00000466579 RAB14P61106 215 aa6.41□□□□□ -1.38
SDCCAG3-208ENST00000466579 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
SDCCAG3-208ENST00000466579 DPH3P1Q9H4G8 78 aa6.41□□□□□ -1.38
SDCCAG3-208ENST00000466579 SSTP61278 116 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 TNP2Q05952 138 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 TWIST1Q15672 202 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 SUMO4Q6EEV6 95 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 FRZBQ92765 325 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.38
SDCCAG3-208ENST00000466579 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 IBA57-AS1B1ANH7 110 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 F5H697 171 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 H7C1H1 209 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 ADIRFQ15847 76 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
SDCCAG3-208ENST00000466579 A0A1B0GUT8 65 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 SMIM27A0A1W2PRY6 76 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 MGPP08493 103 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 LAGE3Q14657 143 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 TMEM97Q5BJF2 176 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 NIT1Q86X76 327 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 NUP35Q8NFH5 326 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 CHCHD7Q9BUK0 85 aa6.38□□□□□ -1.39
SDCCAG3-208ENST00000466579 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 UQCC3Q6UW78 93 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 NIT2Q9NQR4 276 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 TNFRSF18Q9Y5U5 241 aa6.37□□□□□ -1.39
SDCCAG3-208ENST00000466579 PNRC1Q12796 327 aaPredicted RBP6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 IQCJQ1A5X6 159 aa6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 SMIM15Q7Z3B0 74 aa6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 Q8N3U1 123 aa6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 NAT8BQ9UHF3 227 aa6.36□□□□□ -1.39
SDCCAG3-208ENST00000466579 LRP1BQ9NZR2 4599 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 IGHV3-30P01768 117 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 IGHV3-33P01772 117 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 IGHV3-30-3P0DP02 117 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 IGHV3-30-5P0DP03 117 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 RIGQ13278 110 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
SDCCAG3-208ENST00000466579 TRAV26-2A0A0B4J265 109 aa6.34□□□□□ -1.39
SDCCAG3-208ENST00000466579 A0A1B0GW15 77 aa6.34□□□□□ -1.39
SDCCAG3-208ENST00000466579 PPP1R2P9O14990 202 aa6.34□□□□□ -1.39
SDCCAG3-208ENST00000466579 RAB4AP20338 218 aa6.34□□□□□ -1.39
SDCCAG3-208ENST00000466579 PKIAP61925 76 aa6.34□□□□□ -1.39
SDCCAG3-208ENST00000466579 HERC2O95714 4834 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 TRBV25-1A0A075B6N4 114 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 TRAV8-3A0A0A6YYJ7 113 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 IGHV1-24A0A0C4DH33 117 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 TMEM218A2RU14 115 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 ELOBQ15370 118 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 ATRAIDQ6UW56 229 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 ANAPC16Q96DE5 110 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 KIAA1109Q2LD37 5005 aa6.33□□□□□ -1.4
SDCCAG3-208ENST00000466579 RYR1P21817 5038 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 A0A087WTM6 91 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 A0A087WX48 190 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 LRCOL1A6NCL2 159 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 NCR2O95944 276 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 KCNIP4Q6PIL6 250 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 AMN1Q8IY45 258 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
SDCCAG3-208ENST00000466579 A0A1B0GUV1 79 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 MT-ND4LP03901 98 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 POLR2KP53803 58 aaKnown RBP6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
SDCCAG3-208ENST00000466579 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms