RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
HDAC6-214ENST00000465269 MGST1P10620 155 aaKnown RBP9.5□□□□□ -0.89
HDAC6-214ENST00000465269 MLST8Q9BVC4 326 aa9.5□□□□□ -0.89
HDAC6-214ENST00000465269 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 TYMSP04818 313 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 PRSS1P07477 247 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 KRTAP10-8P60410 259 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 PRR27Q6MZM9 219 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 COX8CQ7Z4L0 72 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 OCC1Q8TAD7 63 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 C11orf21Q9P2W6 132 aa9.49□□□□□ -0.89
HDAC6-214ENST00000465269 ZNF727A8MUV8 499 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 SH2D1AO60880 128 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
HDAC6-214ENST00000465269 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 NIT1Q86X76 327 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 SMDT1Q9H4I9 107 aa9.48□□□□□ -0.89
HDAC6-214ENST00000465269 A0A0J9YXV3 536 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 PHOX2AO14813 284 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 ZNF876PQ49A33 203 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 C9orf163Q8N9P6 203 aa9.47□□□□□ -0.89
HDAC6-214ENST00000465269 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 IGKV3D-20A0A0C4DH25 116 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 M0R036 132 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 C14orf177Q52M58 125 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 COMMD7Q86VX2 200 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 SAMD10Q9BYL1 202 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 SDF2L1Q9HCN8 221 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.9
HDAC6-214ENST00000465269 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
HDAC6-214ENST00000465269 K7EN84 100 aa9.45□□□□□ -0.9
HDAC6-214ENST00000465269 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
HDAC6-214ENST00000465269 URGCP-MRPS24S4R325 110 aa9.45□□□□□ -0.9
HDAC6-214ENST00000465269 GRIFINA4D1Z8 144 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 B4DEV8 164 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 KRBOX1C9JBD0 128 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 HLA-DQA1P01909 254 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
HDAC6-214ENST00000465269 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
HDAC6-214ENST00000465269 A0A087WYN8 130 aa9.43□□□□□ -0.9
HDAC6-214ENST00000465269 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
HDAC6-214ENST00000465269 DPH3Q96FX2 82 aa9.43□□□□□ -0.9
HDAC6-214ENST00000465269 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
HDAC6-214ENST00000465269 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
HDAC6-214ENST00000465269 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 UQCC3Q6UW78 93 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-214ENST00000465269 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 RNASE7Q9H1E1 156 aaKnown RBP9.42□□□□□ -0.9
HDAC6-214ENST00000465269 NAT8Q9UHE5 227 aa9.42□□□□□ -0.9
HDAC6-214ENST00000465269 P01737 135 aa9.41□□□□□ -0.9
HDAC6-214ENST00000465269 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
HDAC6-214ENST00000465269 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
HDAC6-214ENST00000465269 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
HDAC6-214ENST00000465269 A0A087WX48 190 aa9.4□□□□□ -0.9
HDAC6-214ENST00000465269 GZMBP10144 247 aa9.4□□□□□ -0.9
HDAC6-214ENST00000465269 RNASE3P12724 160 aaKnown RBP9.4□□□□□ -0.9
HDAC6-214ENST00000465269 ADIRFQ15847 76 aa9.4□□□□□ -0.9
HDAC6-214ENST00000465269 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-214ENST00000465269 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
HDAC6-214ENST00000465269 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
HDAC6-214ENST00000465269 A0A087WWC5 75 aa9.39□□□□□ -0.91
HDAC6-214ENST00000465269 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
HDAC6-214ENST00000465269 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
HDAC6-214ENST00000465269 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
HDAC6-214ENST00000465269 JPT2Q9H910 190 aa9.39□□□□□ -0.91
HDAC6-214ENST00000465269 F8W036 122 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 H3BVH4 76 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 PRR3P79522 188 aaKnown RBP9.38□□□□□ -0.91
HDAC6-214ENST00000465269 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
HDAC6-214ENST00000465269 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
HDAC6-214ENST00000465269 SSTP61278 116 aa9.37□□□□□ -0.91
HDAC6-214ENST00000465269 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
HDAC6-214ENST00000465269 SLC7A5P1Q8MH63 180 aa9.37□□□□□ -0.91
HDAC6-214ENST00000465269 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
HDAC6-214ENST00000465269 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
HDAC6-214ENST00000465269 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 CIDEAO60543 219 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 ADCYAP1P18509 176 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 Q0VG73 95 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 OR10G8Q8NGN5 311 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms