RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 RAB4BP61018 213 aa9.32□□□□□ -0.92
MCF2L-220ENST00000464800 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
MCF2L-220ENST00000464800 CLRN3Q8NCR9 226 aa9.32□□□□□ -0.92
MCF2L-220ENST00000464800 PRR34Q9NV39 138 aa9.32□□□□□ -0.92
MCF2L-220ENST00000464800 AKR1C3P42330 323 aa9.31□□□□□ -0.92
MCF2L-220ENST00000464800 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
MCF2L-220ENST00000464800 STOML3Q8TAV4 291 aa9.31□□□□□ -0.92
MCF2L-220ENST00000464800 DPH3P1Q9H4G8 78 aa9.31□□□□□ -0.92
MCF2L-220ENST00000464800 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
MCF2L-220ENST00000464800 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
MCF2L-220ENST00000464800 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 PRR27Q6MZM9 219 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 Q6ZNX1 250 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 LINC00269Q8N2A0 174 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
MCF2L-220ENST00000464800 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 hDV102S1A0JD36 115 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 G3V3Q6 166 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 ARPC5O15511 151 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 PAGE4O60829 102 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 RBX1P62877 108 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
MCF2L-220ENST00000464800 ZNF471Q9BX82 626 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-220ENST00000464800 A0A087WYN8 130 aa9.28□□□□□ -0.92
MCF2L-220ENST00000464800 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
MCF2L-220ENST00000464800 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
MCF2L-220ENST00000464800 S100A9P06702 114 aaKnown RBP9.28□□□□□ -0.92
MCF2L-220ENST00000464800 GAGE6Q13070 117 aa9.28□□□□□ -0.92
MCF2L-220ENST00000464800 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
MCF2L-220ENST00000464800 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 TRBV25-1A0A075B6N4 114 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-220ENST00000464800 F5H697 171 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 CXCL1P09341 107 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 CHTF8P0CG12 524 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 C7orf33Q8WU49 177 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 SFT2D1Q8WV19 159 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 MLST8Q9BVC4 326 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-220ENST00000464800 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
MCF2L-220ENST00000464800 hCG_2014768A0A024R1R8 64 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 PHOX2AO14813 284 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 SNAI2O43623 268 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 SSTP61278 116 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 REG3AQ06141 175 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 SPANXN1Q5VSR9 72 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 BAGE2Q86Y30 109 aa9.26□□□□□ -0.93
MCF2L-220ENST00000464800 A0A1B0GV50 99 aa9.25□□□□□ -0.93
MCF2L-220ENST00000464800 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
MCF2L-220ENST00000464800 OR5AL1P0C617 328 aa9.25□□□□□ -0.93
MCF2L-220ENST00000464800 MBD3L1Q8WWY6 194 aa9.25□□□□□ -0.93
MCF2L-220ENST00000464800 FAM213BQ8TBF2 198 aa9.24□□□□□ -0.93
MCF2L-220ENST00000464800 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
MCF2L-220ENST00000464800 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
MCF2L-220ENST00000464800 LRP2P98164 4655 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 IGHV1-24A0A0C4DH33 117 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 SMLR1H3BR10 107 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 PFDN1O60925 122 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 P01737 135 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 IQCJQ1A5X6 159 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
MCF2L-220ENST00000464800 TNXBP22105 4242 aa9.22□□□□□ -0.93
MCF2L-220ENST00000464800 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
MCF2L-220ENST00000464800 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
MCF2L-220ENST00000464800 SLPIP03973 132 aa9.22□□□□□ -0.93
MCF2L-220ENST00000464800 KCNRGQ8N5I3 272 aa9.22□□□□□ -0.93
MCF2L-220ENST00000464800 GZMBP10144 247 aa9.21□□□□□ -0.94
MCF2L-220ENST00000464800 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
MCF2L-220ENST00000464800 ODF1Q14990 250 aa9.21□□□□□ -0.94
MCF2L-220ENST00000464800 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
MCF2L-220ENST00000464800 AP1S3Q96PC3 154 aa9.21□□□□□ -0.94
MCF2L-220ENST00000464800 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
MCF2L-220ENST00000464800 RPL35P42766 123 aaKnown RBP9.2□□□□□ -0.94
MCF2L-220ENST00000464800 RAB5CP51148 216 aa9.2□□□□□ -0.94
MCF2L-220ENST00000464800 ZNF345Q14585 488 aa9.2□□□□□ -0.94
MCF2L-220ENST00000464800 WDR73Q6P4I2 378 aa9.2□□□□□ -0.94
MCF2L-220ENST00000464800 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
MCF2L-220ENST00000464800 M0QY20 66 aa9.19□□□□□ -0.94
MCF2L-220ENST00000464800 MGPP08493 103 aa9.19□□□□□ -0.94
MCF2L-220ENST00000464800 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
MCF2L-220ENST00000464800 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
MCF2L-220ENST00000464800 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
MCF2L-220ENST00000464800 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 H7C1H1 209 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 COX6A2Q02221 97 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 AKAP14Q86UN6 197 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
MCF2L-220ENST00000464800 NDUFS6O75380 124 aaKnown RBP9.17□□□□□ -0.94
MCF2L-220ENST00000464800 IGLC6P0CF74 106 aa9.17□□□□□ -0.94
MCF2L-220ENST00000464800 SUMO4Q6EEV6 95 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms