RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PRR27Q6MZM9 219 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 NTM-AS1Q6ZSK4 140 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 PSMG3Q9BT73 122 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-204ENST00000463684 INMT-MINDY4F8WBC2 141 aa9.11□□□□□ -0.95
SMC1A-204ENST00000463684 SLPIP03973 132 aa9.11□□□□□ -0.95
SMC1A-204ENST00000463684 ATP6V0CP27449 155 aa9.11□□□□□ -0.95
SMC1A-204ENST00000463684 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
SMC1A-204ENST00000463684 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
SMC1A-204ENST00000463684 NKX6-2Q9C056 277 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-204ENST00000463684 TRBV6-1A0A0K0K1D8 114 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 GZMBP10144 247 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 UBE2G2P60604 165 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 UBE2G1P62253 170 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
SMC1A-204ENST00000463684 ZNF674Q2M3X9 581 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 TNFSF18Q9UNG2 199 aa9.1□□□□□ -0.95
SMC1A-204ENST00000463684 RAB5CP51148 216 aa9.09□□□□□ -0.95
SMC1A-204ENST00000463684 MAJINQ3KP22 176 aa9.09□□□□□ -0.95
SMC1A-204ENST00000463684 FMC1Q96HJ9 113 aa9.09□□□□□ -0.95
SMC1A-204ENST00000463684 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-204ENST00000463684 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
SMC1A-204ENST00000463684 COX6A2Q02221 97 aa9.08□□□□□ -0.96
SMC1A-204ENST00000463684 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
SMC1A-204ENST00000463684 SPINK6Q6UWN8 80 aa9.08□□□□□ -0.96
SMC1A-204ENST00000463684 NDUFS6O75380 124 aaKnown RBP9.07□□□□□ -0.96
SMC1A-204ENST00000463684 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
SMC1A-204ENST00000463684 OR10AG1Q8NH19 301 aa9.07□□□□□ -0.96
SMC1A-204ENST00000463684 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
SMC1A-204ENST00000463684 IGKV2-24A0A0C4DH68 120 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 SMIM17P0DL12 118 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
SMC1A-204ENST00000463684 SPANXN1Q5VSR9 72 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 STPG4Q8N801 248 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
SMC1A-204ENST00000463684 S100ZQ8WXG8 99 aa9.05□□□□□ -0.96
SMC1A-204ENST00000463684 MARVELD1Q9BSK0 173 aa9.05□□□□□ -0.96
SMC1A-204ENST00000463684 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 A0A1B0GUV1 79 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 LTAP01374 205 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 SSTP61278 116 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
SMC1A-204ENST00000463684 IGLV4-60A0A075B6I1 120 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 UPK1BO75841 260 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 SULT1A2P50226 295 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 ZNF726P1Q15940 193 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 TMEM243Q9BU79 118 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
SMC1A-204ENST00000463684 SNAI2O43623 268 aa9.02□□□□□ -0.97
SMC1A-204ENST00000463684 CXCL1P09341 107 aa9.02□□□□□ -0.97
SMC1A-204ENST00000463684 LINC00299Q6ZSB3 139 aa9.02□□□□□ -0.97
SMC1A-204ENST00000463684 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-204ENST00000463684 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 H7C1H1 209 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 UBE2L6O14933 153 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 AKR1C3P42330 323 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 DEFA3P59666 94 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMC1A-204ENST00000463684 HIGD2BQ4VC39 106 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 CST9LP1Q5W188 147 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 C15orf56Q8N910 161 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
SMC1A-204ENST00000463684 Q6ZRP5 223 aa9□□□□□ -0.97
SMC1A-204ENST00000463684 STOML3Q8TAV4 291 aa9□□□□□ -0.97
SMC1A-204ENST00000463684 BORCS7-ASMTA0A0B4J1R7 106 aa8.99□□□□□ -0.97
SMC1A-204ENST00000463684 MGPP08493 103 aa8.99□□□□□ -0.97
SMC1A-204ENST00000463684 FHITP49789 147 aa8.99□□□□□ -0.97
SMC1A-204ENST00000463684 AKR1C8PQ5T2L2 129 aa8.99□□□□□ -0.97
SMC1A-204ENST00000463684 A0A096LNI7 61 aa8.98□□□□□ -0.97
SMC1A-204ENST00000463684 M0QY20 66 aa8.98□□□□□ -0.97
SMC1A-204ENST00000463684 S100A9P06702 114 aaKnown RBP8.98□□□□□ -0.97
SMC1A-204ENST00000463684 NKX2-5P52952 324 aaPredicted RBP8.98□□□□□ -0.97
SMC1A-204ENST00000463684 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
SMC1A-204ENST00000463684 LPAP08519 4548 aa8.97□□□□□ -0.97
SMC1A-204ENST00000463684 IGKV3OR2-268A0A0C4DH90 116 aa8.97□□□□□ -0.97
SMC1A-204ENST00000463684 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
SMC1A-204ENST00000463684 IFITM3Q01628 133 aa8.97□□□□□ -0.97
SMC1A-204ENST00000463684 RPL7L1Q6DKI1 246 aaKnown RBP8.97□□□□□ -0.97
SMC1A-204ENST00000463684 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
SMC1A-204ENST00000463684 SUMO4Q6EEV6 95 aa8.96□□□□□ -0.98
SMC1A-204ENST00000463684 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
SMC1A-204ENST00000463684 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-204ENST00000463684 PGLYRP4Q96LB8 373 aa8.96□□□□□ -0.98
SMC1A-204ENST00000463684 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
SMC1A-204ENST00000463684 AMTP48728 403 aa8.95□□□□□ -0.98
SMC1A-204ENST00000463684 DEFA1P59665 94 aa8.95□□□□□ -0.98
SMC1A-204ENST00000463684 RASL11AQ6T310 242 aa8.95□□□□□ -0.98
SMC1A-204ENST00000463684 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
SMC1A-204ENST00000463684 COTL1Q14019 142 aa8.94□□□□□ -0.98
SMC1A-204ENST00000463684 CHCHD10Q8WYQ3 142 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms