RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 MPV17L2Q567V2 206 aa10.21□□□□□ -0.77
NUP50-213ENST00000461437 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
NUP50-213ENST00000461437 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 GNG4P50150 75 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 RAB5CP51148 216 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
NUP50-213ENST00000461437 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 C15orf54Q8N8G6 183 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 Q8N976 141 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 TMEM70Q9BUB7 260 aa10.2□□□□□ -0.78
NUP50-213ENST00000461437 BCL2P10415 239 aa10.19□□□□□ -0.78
NUP50-213ENST00000461437 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
NUP50-213ENST00000461437 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
NUP50-213ENST00000461437 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
NUP50-213ENST00000461437 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
NUP50-213ENST00000461437 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
NUP50-213ENST00000461437 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
NUP50-213ENST00000461437 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
NUP50-213ENST00000461437 KCNIP4Q6PIL6 250 aa10.18□□□□□ -0.78
NUP50-213ENST00000461437 Q6ZNX1 250 aa10.18□□□□□ -0.78
NUP50-213ENST00000461437 SLC51BQ86UW2 128 aa10.18□□□□□ -0.78
NUP50-213ENST00000461437 MYCBP2O75592 4640 aa10.18□□□□□ -0.78
NUP50-213ENST00000461437 TEX46H3BTG2 121 aa10.17□□□□□ -0.78
NUP50-213ENST00000461437 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
NUP50-213ENST00000461437 GAGE6Q13070 117 aa10.17□□□□□ -0.78
NUP50-213ENST00000461437 SUMO4Q6EEV6 95 aa10.17□□□□□ -0.78
NUP50-213ENST00000461437 RMI2Q96E14 147 aa10.17□□□□□ -0.78
NUP50-213ENST00000461437 IFNA1P01562 189 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 P01737 135 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 LYZL1Q6UWQ5 148 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 C9orf62Q8N4C0 152 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
NUP50-213ENST00000461437 M0QY20 66 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 PDE6DO43924 150 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 CRPP02741 224 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
NUP50-213ENST00000461437 ELOBQ15370 118 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 NUDT11Q96G61 164 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
NUP50-213ENST00000461437 VAX2Q9UIW0 290 aa10.15□□□□□ -0.78
NUP50-213ENST00000461437 K7EN84 100 aa10.14□□□□□ -0.79
NUP50-213ENST00000461437 NKX2-5P52952 324 aaPredicted RBP10.14□□□□□ -0.79
NUP50-213ENST00000461437 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
NUP50-213ENST00000461437 Q6ZSA8 131 aa10.14□□□□□ -0.79
NUP50-213ENST00000461437 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
NUP50-213ENST00000461437 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
NUP50-213ENST00000461437 DMBT1Q9UGM3 2413 aaPredicted RBP10.13□□□□□ -0.79
NUP50-213ENST00000461437 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
NUP50-213ENST00000461437 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
NUP50-213ENST00000461437 RBX1P62877 108 aa10.13□□□□□ -0.79
NUP50-213ENST00000461437 CACNG7P62955 275 aa10.13□□□□□ -0.79
NUP50-213ENST00000461437 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
NUP50-213ENST00000461437 SRRM2Q9UQ35 2752 aaKnown RBP10.12□□□□□ -0.79
NUP50-213ENST00000461437 NTF3P20783 257 aa10.12□□□□□ -0.79
NUP50-213ENST00000461437 Q0VG73 95 aa10.12□□□□□ -0.79
NUP50-213ENST00000461437 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
NUP50-213ENST00000461437 OCC1Q8TAD7 63 aa10.12□□□□□ -0.79
NUP50-213ENST00000461437 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
NUP50-213ENST00000461437 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
NUP50-213ENST00000461437 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
NUP50-213ENST00000461437 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
NUP50-213ENST00000461437 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 XKRY2A2RUG3 117 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
NUP50-213ENST00000461437 RASL11AQ6T310 242 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
NUP50-213ENST00000461437 RPP21Q9H633 154 aaKnown RBP10.1□□□□□ -0.79
NUP50-213ENST00000461437 F2Z2F3 143 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 CTRLP40313 264 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 CEBPGP53567 150 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 TWIST1Q15672 202 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
NUP50-213ENST00000461437 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
NUP50-213ENST00000461437 H7C1H1 209 aa10.08□□□□□ -0.8
NUP50-213ENST00000461437 TMEM97Q5BJF2 176 aa10.08□□□□□ -0.8
NUP50-213ENST00000461437 C20orf203Q8NBC4 194 aa10.08□□□□□ -0.8
NUP50-213ENST00000461437 GTSF1Q8WW33 167 aa10.08□□□□□ -0.8
NUP50-213ENST00000461437 PRSS1P07477 247 aa10.07□□□□□ -0.8
NUP50-213ENST00000461437 MIAQ16674 131 aa10.07□□□□□ -0.8
NUP50-213ENST00000461437 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
NUP50-213ENST00000461437 BIN3Q9NQY0 253 aa10.07□□□□□ -0.8
NUP50-213ENST00000461437 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
NUP50-213ENST00000461437 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
NUP50-213ENST00000461437 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
NUP50-213ENST00000461437 REG3AQ06141 175 aa10.06□□□□□ -0.8
NUP50-213ENST00000461437 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
NUP50-213ENST00000461437 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
NUP50-213ENST00000461437 NIT2Q9NQR4 276 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms