RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
HDAC4-207ENST00000461113 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
HDAC4-207ENST00000461113 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 GAGE1Q13065 139 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 GAGE4Q13068 117 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 GAGE5Q13069 117 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 ESRGQ1W209 222 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 Q6ZR54 194 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 ATP6V0E2Q8NHE4 81 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 SEC11CQ9BY50 192 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 MSRB1Q9NZV6 116 aa8.66□□□□□ -1.02
HDAC4-207ENST00000461113 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 S100A8P05109 93 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 EVI2AP22794 236 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 NDUFA5Q16718 116 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 LYPD5Q6UWN5 251 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 Q6ZSN1 163 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
HDAC4-207ENST00000461113 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
HDAC4-207ENST00000461113 TRAV8-6A0A0B4J262 113 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 A0A1B0GW15 77 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 SMIM27A0A1W2PRY6 76 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 TIRAPP58753 221 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
HDAC4-207ENST00000461113 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 A0A087WWC5 75 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 UPK3BQ9BT76 320 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 Q9H8V8 135 aa8.63□□□□□ -1.03
HDAC4-207ENST00000461113 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 TNP2Q05952 138 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 TTC32Q5I0X7 151 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 OR10J3Q5JRS4 329 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
HDAC4-207ENST00000461113 SIVA1O15304 175 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 LELP1Q5T871 98 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 KCNIP4Q6PIL6 250 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 RASL11AQ6T310 242 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 FRZBQ92765 325 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
HDAC4-207ENST00000461113 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 S100PP25815 95 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 CAMPP49913 170 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 LINC00315P59091 139 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
HDAC4-207ENST00000461113 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 NIT2Q9NQR4 276 aa8.6□□□□□ -1.03
HDAC4-207ENST00000461113 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
HDAC4-207ENST00000461113 M0QY20 66 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 PPP1R17O96001 155 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 UBE2D3P61077 147 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 UBE2D2P62837 147 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 HBBP68871 147 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
HDAC4-207ENST00000461113 K7EP13 123 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 RHEBQ15382 184 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
HDAC4-207ENST00000461113 MRAP2Q96G30 205 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
HDAC4-207ENST00000461113 URGCP-MRPS24S4R325 110 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 MYCBP2O75592 4640 aa8.58□□□□□ -1.04
HDAC4-207ENST00000461113 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 NBDYA0A0U1RRE5 68 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 SNAPINO95295 136 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 APOC3P02656 99 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 PKIAP61925 76 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 SVBPQ8N300 66 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 RPS10P5Q9NQ39 176 aa8.57□□□□□ -1.04
HDAC4-207ENST00000461113 AMN1Q8IY45 258 aa8.56□□□□□ -1.04
HDAC4-207ENST00000461113 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
HDAC4-207ENST00000461113 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
HDAC4-207ENST00000461113 Q9UF83 564 aa8.56□□□□□ -1.04
HDAC4-207ENST00000461113 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 C7orf77A4D0Y5 90 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 RAB4AP20338 218 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 FAM104BQ5XKR9 115 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 TMEM242Q9NWH2 141 aa8.55□□□□□ -1.04
HDAC4-207ENST00000461113 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
HDAC4-207ENST00000461113 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
HDAC4-207ENST00000461113 A0A087WX48 190 aa8.54□□□□□ -1.04
HDAC4-207ENST00000461113 TRBV6-8A0A0A6YYG3 113 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms