RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 LY6HO94772 140 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 HERV-K104P63124 156 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 C15orf53Q8NAA6 179 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 RNASE3P12724 160 aaKnown RBP11.63□□□□□ -0.55
SSR4-206ENST00000460616 RPL13AP40429 203 aaKnown RBP11.63□□□□□ -0.55
SSR4-206ENST00000460616 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
SSR4-206ENST00000460616 LINC00315P59091 139 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 FAM159AQ6UWV7 190 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 ARHGAP32A7KAX9 2087 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 TRBV7-1A0A0A6YYK4 115 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.62□□□□□ -0.55
SSR4-206ENST00000460616 G3V318 75 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 KLK9Q2XQG4 91 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
SSR4-206ENST00000460616 KLK9Q9UKQ9 250 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 KIF25-AS1Q9Y6Z4 181 aa11.62□□□□□ -0.55
SSR4-206ENST00000460616 TRBV10-2A0A0K0K1G8 114 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 OVOL1O14753 267 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 LEPROTO15243 131 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 DEFB1P60022 68 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
SSR4-206ENST00000460616 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 F5H697 171 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 H3BMM0 161 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 NRGNQ92686 78 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
SSR4-206ENST00000460616 SDHAF1A6NFY7 115 aa11.59□□□□□ -0.55
SSR4-206ENST00000460616 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
SSR4-206ENST00000460616 JPT2Q9H910 190 aa11.59□□□□□ -0.55
SSR4-206ENST00000460616 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
SSR4-206ENST00000460616 LGALS9O00182 355 aa11.59□□□□□ -0.55
SSR4-206ENST00000460616 TRBV30A0A0K0K1B3 111 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 POLQO75417 2590 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 ABCA12Q86UK0 2595 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 A0A087WWL8 130 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 TRIAP1O43715 76 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 NXPH4O95158 308 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 C2orf82Q6UX34 121 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 C1orf122Q6ZSJ8 110 aa11.58□□□□□ -0.56
SSR4-206ENST00000460616 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
SSR4-206ENST00000460616 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 MEIG1Q5JSS6 88 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 F6UB75 175 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 M0R2P5 195 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 FAM19A4Q96LR4 140 aa11.57□□□□□ -0.56
SSR4-206ENST00000460616 ZNF256Q9Y2P7 627 aaPredicted RBP11.56□□□□□ -0.56
SSR4-206ENST00000460616 KRTAP10-9P60411 292 aa11.55□□□□□ -0.56
SSR4-206ENST00000460616 APRG1Q8IVJ8 170 aa11.55□□□□□ -0.56
SSR4-206ENST00000460616 H7C423 109 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 IGHV1-69P01742 117 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
SSR4-206ENST00000460616 RPL11P62913 178 aaKnown RBP11.54□□□□□ -0.56
SSR4-206ENST00000460616 MRPL23Q16540 153 aaKnown RBP11.54□□□□□ -0.56
SSR4-206ENST00000460616 SVEP1Q4LDE5 3571 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 A0A0J9YX75 114 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 A0A0J9YXY3 114 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 SOCS3O14543 225 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 ZNF56Q15929 161 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 MDFICQ9P1T7 246 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 ASH1LQ9NR48 2969 aaKnown RBP11.54□□□□□ -0.56
SSR4-206ENST00000460616 HECTD1Q9ULT8 2610 aa11.54□□□□□ -0.56
SSR4-206ENST00000460616 PRSS2P07478 247 aa11.53□□□□□ -0.56
SSR4-206ENST00000460616 TRBV6-5A0A0K0K1A5 114 aa11.53□□□□□ -0.56
SSR4-206ENST00000460616 UNQ9165/PRO28630Q6UXU0 137 aa11.53□□□□□ -0.56
SSR4-206ENST00000460616 A0A0J9YXV3 536 aa11.52□□□□□ -0.56
SSR4-206ENST00000460616 FAM74A4Q5TZK3 123 aa11.52□□□□□ -0.56
SSR4-206ENST00000460616 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.56
SSR4-206ENST00000460616 APCP25054 2843 aa11.52□□□□□ -0.56
SSR4-206ENST00000460616 COX6CP09669 75 aa11.52□□□□□ -0.57
SSR4-206ENST00000460616 UBE2E1P51965 193 aa11.52□□□□□ -0.57
SSR4-206ENST00000460616 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
SSR4-206ENST00000460616 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
SSR4-206ENST00000460616 ZNF580Q9UK33 172 aa11.52□□□□□ -0.57
SSR4-206ENST00000460616 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.57
SSR4-206ENST00000460616 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
SSR4-206ENST00000460616 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
SSR4-206ENST00000460616 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
SSR4-206ENST00000460616 H3BT86 120 aa11.51□□□□□ -0.57
SSR4-206ENST00000460616 NSUN5P1Q3KNT7 163 aa11.51□□□□□ -0.57
SSR4-206ENST00000460616 MUC4Q99102 2169 aa11.51□□□□□ -0.57
SSR4-206ENST00000460616 RHOHQ15669 191 aa11.5□□□□□ -0.57
SSR4-206ENST00000460616 CCL19Q99731 98 aa11.5□□□□□ -0.57
SSR4-206ENST00000460616 SPXQ9BT56 116 aa11.5□□□□□ -0.57
SSR4-206ENST00000460616 FAM240AA0A1B0GVK7 77 aa11.49□□□□□ -0.57
SSR4-206ENST00000460616 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
SSR4-206ENST00000460616 LITAFQ99732 161 aa11.49□□□□□ -0.57
SSR4-206ENST00000460616 SIRPDQ9H106 197 aa11.49□□□□□ -0.57
SSR4-206ENST00000460616 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
SSR4-206ENST00000460616 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
SSR4-206ENST00000460616 M0QY20 66 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms